RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 C2P06681 752 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 SLC35E2BP0CK96 405 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 CCDC166P0CW27 439 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 MPC1LP0DKB6 136 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 CRABP2P29373 138 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 FASLGP48023 281 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 NOVA1P51513 510 aaKnown RBP11.59□□□□□ -0.55
CUX1-210ENST00000497815 OR1D5P58170 312 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 IRF9Q00978 393 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 AMZ1Q400G9 498 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 CCSMST1Q4G0I0 132 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 TAF1BQ53T94 588 aaPredicted RBP11.59□□□□□ -0.55
CUX1-210ENST00000497815 LRRC8EQ6NSJ5 796 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 FBXO38Q6PIJ6 1188 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 UNC5DQ6UXZ4 953 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 CYHR1Q6ZMK1 362 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 TMEM26Q6ZUK4 368 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 NEK10Q6ZWH5 1172 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 UBE2R2Q712K3 238 aaPredicted RBP11.59□□□□□ -0.55
CUX1-210ENST00000497815 TBC1D1Q86TI0 1168 aaPredicted RBP11.59□□□□□ -0.55
CUX1-210ENST00000497815 CYP4X1Q8N118 509 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 NKAPQ8N5F7 415 aaKnown RBP11.59□□□□□ -0.55
CUX1-210ENST00000497815 AVL9Q8NBF6 648 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 OR6C4Q8NGE1 309 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 NAT6Q93015 286 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 SH3KBP1Q96B97 665 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 NRTNQ99748 197 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 CCDC3Q9BQI4 270 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 TBC1D10AQ9BXI6 508 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 ZMYND15Q9H091 742 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 XKR8Q9H6D3 395 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 MVB12BQ9H7P6 319 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 PPCSQ9HAB8 311 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 KCNK4Q9NYG8 393 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 ADAMTS6Q9UKP5 1117 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 ACOT9Q9Y305 439 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 KNL1Q8NG31 2342 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 DNAH14Q0VDD8 3507 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 A0A087X1B8 175 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 DCDC2BA2VCK2 349 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 NPEPPSL1A6NEC2 478 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 ARHGEF33A8MVX0 844 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 GOLGA8RI6L899 631 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 EIF3FO00303 357 aaPredicted RBP11.58□□□□□ -0.56
CUX1-210ENST00000497815 CDC7O00311 574 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 BTN3A1O00481 513 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 CDH16O75309 829 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 PSIP1O75475 530 aaKnown RBP11.58□□□□□ -0.56
CUX1-210ENST00000497815 TCEA3O75764 348 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 WISP3O95389 354 aaPredicted RBP11.58□□□□□ -0.56
CUX1-210ENST00000497815 MATN4O95460 622 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 C1orf105O95561 183 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 SYF2O95926 243 aaKnown RBP11.58□□□□□ -0.56
CUX1-210ENST00000497815 CATP04040 527 aaKnown RBP11.58□□□□□ -0.56
CUX1-210ENST00000497815 RPN2P04844 631 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 H2AFXP16104 143 aaPredicted RBP11.58□□□□□ -0.56
CUX1-210ENST00000497815 KRT15P19012 456 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 CSRP1P21291 193 aaKnown RBP11.58□□□□□ -0.56
CUX1-210ENST00000497815 ACP1P24666 158 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 NDUFS1P28331 727 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 ACADVLP49748 655 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 SIM1P81133 766 aaPredicted RBP11.58□□□□□ -0.56
CUX1-210ENST00000497815 ZNF844Q08AG5 666 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 CSHL1Q14406 222 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 KRT71Q3SY84 523 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.58□□□□□ -0.56
CUX1-210ENST00000497815 NKAIN2Q5VXU1 208 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 TTC23LQ6PF05 361 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 TDRPQ86YL5 185 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 DCUN1D3Q8IWE4 304 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 TBC1D21Q8IYX1 336 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 LMNTD1Q8N9Z9 388 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 OR52E1Q8NGJ3 308 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 OR5K2Q8NHB8 316 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 KCTD4Q8WVF5 259 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 LCN9Q8WX39 176 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 ASB11Q8WXH4 323 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 MTBPQ96DY7 904 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 ZIM3Q96PE6 472 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.58□□□□□ -0.56
CUX1-210ENST00000497815 KIR3DX1Q9H7L2 352 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 PCMTD2Q9NV79 361 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 POLG2Q9UHN1 485 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 IKZF3Q9UKT9 509 aa11.58□□□□□ -0.56
CUX1-210ENST00000497815 EP300Q09472 2414 aaPredicted RBP11.58□□□□□ -0.56
CUX1-210ENST00000497815 COL5A1P20908 1838 aaPredicted RBP11.58□□□□□ -0.56
CUX1-210ENST00000497815 WDR87Q6ZQQ6 2873 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 A0A1W2PPM1 405 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 B4GAT1O43505 415 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 ZBTB14O43829 449 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 RFPL1O75677 317 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 MT-ND3P03897 115 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 MPOP05164 745 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 RPLP0P05388 317 aaKnown RBP11.57□□□□□ -0.56
CUX1-210ENST00000497815 TPBGLP0DKB5 382 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 CD1DP15813 335 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 TYRP1P17643 537 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 SDHBP21912 280 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 MAP4P27816 1152 aaKnown RBP11.57□□□□□ -0.56
CUX1-210ENST00000497815 GLRBP48167 497 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms