RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 LEXMQ3ZCV2 418 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 ACSM2BQ68CK6 577 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 MED27Q6P2C8 311 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 CDC26Q8NHZ8 85 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 SETD7Q8WTS6 366 aaKnown RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 FOXJ1Q92949 421 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 BIRC8Q96P09 236 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 ADA2Q9NZK5 511 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 PIPSLA2A3N6 862 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 URADA6NGE7 173 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 ANKDD1BA6NHY2 528 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 DCXO43602 365 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 ITM2AO43736 263 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 UGDHO60701 494 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 COQ9O75208 318 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 EGFP01133 1207 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 SNRPB2P08579 225 aaKnown RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 RPS17P08708 135 aaKnown RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 SOX9P48436 509 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 CLCN7P51798 805 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 AP2B1P63010 937 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 NAE1Q13564 534 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 UNC50Q53HI1 259 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 TMEM196Q5HYL7 178 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 WASHC2DQ5SRD0 308 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 LIPJQ5W064 366 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 RD3Q7Z3Z2 195 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 GOLGA7Q7Z5G4 137 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 OR2L2Q8NH16 312 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 DNAJB8Q8NHS0 232 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 SMPDL3AQ92484 453 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 N4BP2L2Q92802 583 aaPredicted RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 PLA2G2FQ9BZM2 168 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 LRMDAQ9H2I8 198 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 LEF1Q9UJU2 399 aaPredicted RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 PRPF19Q9UMS4 504 aaKnown RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 TMED5Q9Y3A6 229 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 PRAMEF26H0Y7S4 382 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 AIM2O14862 343 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 AREL1O15033 823 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 FGF4P08620 206 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 HSD3B1P14060 373 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 HSD3B2P26439 372 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 CMPK1P30085 196 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 DPP6P42658 865 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 ASMTP46597 345 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 KIAA1024LP59773 190 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 CDK3Q00526 305 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 OR4D1Q15615 310 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 CTC1Q2NKJ3 1217 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 TRMT5Q32P41 509 aaKnown RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 PLA2G4EQ3MJ16 856 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 PRPF38BQ5VTL8 546 aaKnown RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 FAM91A1Q658Y4 838 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 SLC44A3Q8N4M1 653 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 ZNF483Q8TF39 744 aaPredicted RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 MSLNLQ96KJ4 702 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 ATOH8Q96SQ7 321 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 FAM129BQ96TA1 746 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 BOCQ9BWV1 1114 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 PCED1AQ9H1Q7 454 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 CARS2Q9HA77 564 aaKnown RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 LMAN1LQ9HAT1 526 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 ETAA1Q9NY74 926 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 PIK3R1P27986 724 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 CDKN1CP49918 316 aaPredicted RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 TMEM215Q68D42 235 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 GLB1L3Q8NCI6 653 aaPredicted RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 ANKRD49Q8WVL7 239 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 ATAD3AQ9NVI7 634 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 DNAAF2Q9NVR5 837 aaKnown RBP8.19□□□□□ -1.1
USP54-215ENST00000497106 ITM2BQ9Y287 266 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 IQCF5A8MTL0 148 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 CHRNGP07510 517 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 CTSLP07711 333 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 EPHA3P29320 983 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 ANXA11P50995 505 aaKnown RBP8.18□□□□□ -1.1
USP54-215ENST00000497106 GRIK2Q13002 908 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 KLF10Q13118 480 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 INPP5AQ14642 412 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 ENPP7Q6UWV6 458 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 R3HCC1LQ7Z5L2 792 aaKnown RBP8.18□□□□□ -1.1
USP54-215ENST00000497106 RGL4Q8IZJ4 473 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 SRFBP1Q8NEF9 429 aaKnown RBP8.18□□□□□ -1.1
USP54-215ENST00000497106 TFGQ92734 400 aaPredicted RBP8.18□□□□□ -1.1
USP54-215ENST00000497106 RAD21L1Q9H4I0 556 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 TRIM45Q9H8W5 580 aaPredicted RBP8.18□□□□□ -1.1
USP54-215ENST00000497106 COPS7BQ9H9Q2 264 aaPredicted RBP8.18□□□□□ -1.1
USP54-215ENST00000497106 MEAF6Q9HAF1 191 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 STOML1Q9UBI4 398 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 MYO18AQ92614 2054 aaKnown RBP8.18□□□□□ -1.1
USP54-215ENST00000497106 NEMP2A6NFY4 417 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 CCDC154A6NI56 674 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 PLRG1O43660 514 aaKnown RBP8.18□□□□□ -1.1
USP54-215ENST00000497106 MTX2O75431 263 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 PRSS56P0CW18 603 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 RALGDSQ12967 914 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 CHIT1Q13231 466 aa8.18□□□□□ -1.1
USP54-215ENST00000497106 PRKG2Q13237 762 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms