RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 STX2P32856 288 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CAPGP40121 348 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC1A3P43003 542 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ALDH3B1P43353 468 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 GPR4P46093 362 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 LSSP48449 732 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC11A2P49281 568 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CDC34P49427 236 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CDK7P50613 346 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TNFRSF17Q02223 184 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 GALNT2Q10471 571 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 LCP2Q13094 533 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 GPR176Q14439 515 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ICAM4Q14773 271 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 DUSP7Q16829 419 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 GLE1Q53GS7 698 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 GLRA4Q5JXX5 417 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PDSS1Q5T2R2 415 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM160B1Q5W0V3 765 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ANKS6Q68DC2 871 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 IL20RBQ6UXL0 311 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CHST3Q7LGC8 479 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 HDDC2Q7Z4H3 204 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PXKQ7Z7A4 578 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 RTN4RL1Q86UN2 441 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MON1AQ86VX9 555 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 HORMAD1Q86X24 394 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC13A5Q86YT5 568 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PLCZ1Q86YW0 608 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CNTN4Q8IWV2 1026 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 DDIASQ8IXT1 998 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MICU2Q8IYU8 434 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF786Q8N393 782 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SFRP1Q8N474 314 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MINDY1Q8N5J2 469 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC25A41Q8N5S1 370 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 RTL3Q8N8U3 475 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 C12orf29Q8N999 325 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CHST14Q8NCH0 376 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 BHLHE23Q8NDY6 225 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 OR6Q1Q8NGQ2 317 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 RAET1EQ8TD07 263 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PAQR8Q8TEZ7 354 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 NKD2Q969F2 451 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 DGCR14Q96DF8 476 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TMEM80Q96HE8 168 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TPD52L3Q96J77 140 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CYP2S1Q96SQ9 504 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 VRK1Q99986 396 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ACBD6Q9BR61 282 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TEKT3Q9BXF9 490 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ALX4Q9H161 411 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 EPC1Q9H2F5 836 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PCIF1Q9H4Z3 704 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 C11orf49Q9H6J7 331 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 NARFLQ9H6Q4 476 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TDRD3Q9H7E2 651 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 METTL8Q9H825 291 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 NMUR1Q9HB89 426 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SEPSECSQ9HD40 501 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TDP1Q9NUW8 608 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 OXSMQ9NWU1 459 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 DNAJC28Q9NX36 388 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 THEGQ9P2T0 379 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SRRDQ9UH36 339 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 NOCTQ9UK39 431 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MAN1B1Q9UKM7 699 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TBC1D30Q9Y2I9 924 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MFHAS1Q9Y4C4 1052 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PCDHGA5Q9Y5G8 931 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 B3GALT1Q9Y5Z6 326 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PSAT1Q9Y617 370 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MAU2Q9Y6X3 613 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 RTL1A6NKG5 1358 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TDRD9Q8NDG6 1382 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 GNG14A0A1W2PPG7 69 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 A0A1W2PQ09 198 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 A0A1W2PRG6 482 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MROH6A6NGR9 719 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF716A6NP11 495 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CBX4O00257 560 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SYT5O00445 386 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ITGB1BP1O14713 200 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ACOX3O15254 700 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 INPPL1O15357 1258 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TOX3O15405 576 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC31A2O15432 143 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 GPR42O15529 346 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PPIP5K2O43314 1243 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 RHOBTB1O94844 696 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SORBS2O94875 1100 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF202O95125 648 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ZFPL1O95159 310 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SYF2O95926 243 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM107AO95990 144 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ALPPP05187 535 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CRYGCP07315 174 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF735P0CB33 412 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms