RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TBC1D21Q8IYX1 336 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 OR6C4Q8NGE1 309 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 OR5K2Q8NHB8 316 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 MAGEC3Q8TD91 643 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 ZFPM2Q8WW38 1151 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 ASB11Q8WXH4 323 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 PGM2Q96G03 612 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 TSNARE1Q96NA8 513 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 FERD3LQ96RJ6 166 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 CENPHQ9H3R5 247 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 NMRAL1Q9HBL8 299 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 POLG2Q9UHN1 485 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 BTBD3Q9Y2F9 522 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.21■□□□□ 0.99
C9orf3-222ENST00000496567 A0A1W2PPM1 405 aa21.21■□□□□ 0.99
C9orf3-222ENST00000496567 ZBTB14O43829 449 aa21.21■□□□□ 0.99
C9orf3-222ENST00000496567 PSIP1O75475 530 aaKnown RBP21.21■□□□□ 0.99
C9orf3-222ENST00000496567 KLHL2O95198 593 aa21.21■□□□□ 0.99
C9orf3-222ENST00000496567 MAZP56270 477 aaKnown RBP21.21■□□□□ 0.99
C9orf3-222ENST00000496567 SP140Q13342 867 aa21.21■□□□□ 0.99
C9orf3-222ENST00000496567 NR0B2Q15466 257 aa21.21■□□□□ 0.99
C9orf3-222ENST00000496567 KLC3Q6P597 504 aa21.21■□□□□ 0.99
C9orf3-222ENST00000496567 LCA5Q86VQ0 697 aa21.21■□□□□ 0.99
C9orf3-222ENST00000496567 NAXDQ8IW45 347 aa21.21■□□□□ 0.99
C9orf3-222ENST00000496567 PHC3Q8NDX5 983 aa21.21■□□□□ 0.99
C9orf3-222ENST00000496567 SH3KBP1Q96B97 665 aa21.21■□□□□ 0.99
C9orf3-222ENST00000496567 STMN4Q9H169 189 aaPredicted RBP21.21■□□□□ 0.99
C9orf3-222ENST00000496567 PCMTD2Q9NV79 361 aa21.21■□□□□ 0.99
C9orf3-222ENST00000496567 PADI4Q9UM07 663 aa21.21■□□□□ 0.99
C9orf3-222ENST00000496567 RUVBL2Q9Y230 463 aaKnown RBP21.21■□□□□ 0.99
C9orf3-222ENST00000496567 GFYI3L273 518 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 MAP2K7O14733 419 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 SLC16A5O15375 505 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 PYGBP11216 843 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 CD1DP15813 335 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 DUSP3P51452 185 aaPredicted RBP21.2■□□□□ 0.98
C9orf3-222ENST00000496567 IRF9Q00978 393 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 DUS1LQ6P1R4 473 aaKnown RBP21.2■□□□□ 0.98
C9orf3-222ENST00000496567 UBE2R2Q712K3 238 aaPredicted RBP21.2■□□□□ 0.98
C9orf3-222ENST00000496567 TRABD2AQ86V40 505 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 DCUN1D3Q8IWE4 304 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 CENPLQ8N0S6 344 aaPredicted RBP21.2■□□□□ 0.98
C9orf3-222ENST00000496567 OR5AR1Q8NGP9 310 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 KCTD4Q8WVF5 259 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 ACBD3Q9H3P7 528 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 SLC40A1Q9NP59 571 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 SENP1Q9P0U3 644 aa21.2■□□□□ 0.98
C9orf3-222ENST00000496567 ARID1BQ8NFD5 2236 aaPredicted RBP21.2■□□□□ 0.98
C9orf3-222ENST00000496567 GOLGA8RI6L899 631 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 BTN3A1O00481 513 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 NUDT21O43809 227 aaKnown RBP21.19■□□□□ 0.98
C9orf3-222ENST00000496567 SH3BP5O60239 455 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 KDM1AO60341 852 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 C1orf105O95561 183 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 LDOC1O95751 146 aaPredicted RBP21.19■□□□□ 0.98
C9orf3-222ENST00000496567 GLB1P16278 677 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 CYP2A7P20853 494 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 MAP4P27816 1152 aaKnown RBP21.19■□□□□ 0.98
C9orf3-222ENST00000496567 TSNAXIP1Q2TAA8 658 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 PROX2Q3B8N5 592 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.19■□□□□ 0.98
C9orf3-222ENST00000496567 ADAMTSL2Q86TH1 951 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 KIAA2013Q8IYS2 634 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 SPATA6LQ8N4H0 392 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 NXNL1Q96CM4 212 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.19■□□□□ 0.98
C9orf3-222ENST00000496567 IGSF5Q9NSI5 407 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 RIF1Q5UIP0 2472 aaKnown RBP21.19■□□□□ 0.98
C9orf3-222ENST00000496567 CCDC189A1A4V9 331 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 PABPN1LA6NDY0 278 aaKnown RBP21.19■□□□□ 0.98
C9orf3-222ENST00000496567 RHPN2P1A8MT19 583 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 GSTA1P08263 222 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 KRT4P19013 534 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 KPNA2P52292 529 aaKnown RBP21.19■□□□□ 0.98
C9orf3-222ENST00000496567 DAB2P98082 770 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 DLG1Q12959 904 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 CLEC14AQ86T13 490 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 RASGRP3Q8IV61 690 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 SRRM1Q8IYB3 904 aaKnown RBP21.19■□□□□ 0.98
C9orf3-222ENST00000496567 FBXO15Q8NCQ5 510 aaPredicted RBP21.19■□□□□ 0.98
C9orf3-222ENST00000496567 MCOLN3Q8TDD5 553 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 NETO1Q8TDF5 533 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 RAD51AP1Q96B01 352 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 CNDP2Q96KP4 475 aaKnown RBP21.19■□□□□ 0.98
C9orf3-222ENST00000496567 SLC12A9Q9BXP2 914 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 TRIM54Q9BYV2 358 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 KIR3DX1Q9H7L2 352 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 UCK1Q9HA47 277 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 PARVBQ9HBI1 364 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 LRIT1Q9P2V4 623 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 FTSJ1Q9UET6 329 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 DCDC2Q9UHG0 476 aa21.19■□□□□ 0.98
C9orf3-222ENST00000496567 NOVA2Q9UNW9 492 aaKnown RBP21.19■□□□□ 0.98
C9orf3-222ENST00000496567 COL5A1P20908 1838 aaPredicted RBP21.18■□□□□ 0.98
C9orf3-222ENST00000496567 FOXO6A8MYZ6 492 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 AGPSO00116 658 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 ENO2P09104 434 aaPredicted RBP21.18■□□□□ 0.98
C9orf3-222ENST00000496567 CKMT1AP12532 417 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 GMPRP36959 345 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 PRKG2Q13237 762 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms