RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	GSK3A	P49840	483 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	KCNK10	P57789	538 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	DYNLT1	P63172	113 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	SRSF11	Q05519	484 aa	Known RBP	7.58	□□□□□ -1.2
NVL-223	ENST00000496393	SSPN	Q14714	243 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	LONRF2	Q1L5Z9	754 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	SIRPB2	Q5JXA9	342 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	MICALCL	Q6ZW33	695 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	GDF7	Q7Z4P5	450 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	CFAP206	Q8IYR0	622 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	GPR135	Q8IZ08	494 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	CARF	Q8N187	725 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	NXPE1	Q8N323	547 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	ZNF655	Q8N720	491 aa	Predicted RBP	7.58	□□□□□ -1.2
NVL-223	ENST00000496393	PLD5	Q8N7P1	536 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	OR2Y1	Q8NGV0	311 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	DNAJB14	Q8TBM8	379 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	7.58	□□□□□ -1.2
NVL-223	ENST00000496393	FAF2	Q96CS3	445 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	RBM41	Q96IZ5	413 aa	Known RBP	7.58	□□□□□ -1.2
NVL-223	ENST00000496393	MAGEB10	Q96LZ2	347 aa	Predicted RBP	7.58	□□□□□ -1.2
NVL-223	ENST00000496393	IP6K3	Q96PC2	410 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	FERD3L	Q96RJ6	166 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	HGH1	Q9BTY7	390 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	DHRS4	Q9BTZ2	278 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	SPRTN	Q9H040	489 aa	Predicted RBP	7.58	□□□□□ -1.2
NVL-223	ENST00000496393	GLOD4	Q9HC38	313 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	FAM60A	Q9NP50	221 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	SLC6A20	Q9NP91	592 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	AIPL1	Q9NZN9	384 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	SH3BGRL2	Q9UJC5	107 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	CNTRL	Q7Z7A1	2325 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	NUP210L	Q5VU65	1888 aa		7.58	□□□□□ -1.2
NVL-223	ENST00000496393	PCM1	Q15154	2024 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	NF1	P21359	2839 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	PKDREJ	Q9NTG1	2253 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393		A0A0A6YYK5	440 aa	Predicted RBP	7.57	□□□□□ -1.2
NVL-223	ENST00000496393	LRRD1	A4D1F6	860 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	LRRC10B	A6NIK2	292 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	MATN2	O00339	956 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	GAPDHS	O14556	408 aa	Predicted RBP	7.57	□□□□□ -1.2
NVL-223	ENST00000496393	DIAPH2	O60879	1101 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	PROSC	O94903	275 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	PRAMEF1	O95521	474 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	CYP1A2	P05177	515 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	HBQ1	P09105	142 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	NFKB1	P19838	968 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	NDUFS1	P28331	727 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	HMGCL	P35914	325 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	TSFM	P43897	325 aa	Known RBP	7.57	□□□□□ -1.2
NVL-223	ENST00000496393	WNT3A	P56704	352 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	TMPRSS15	P98073	1019 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	PRKG2	Q13237	762 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	ZNF169	Q14929	603 aa	Predicted RBP	7.57	□□□□□ -1.2
NVL-223	ENST00000496393	PDK2	Q15119	407 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	NFKBIB	Q15653	356 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	STX1A	Q16623	288 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	C4orf48	Q5BLP8	95 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	DESI1	Q6ICB0	168 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	SASS6	Q6UVJ0	657 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	FAM180A	Q6UWF9	173 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	LYPD8	Q6UX82	237 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	LINC00696	Q6ZRV3	163 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	SHISA6	Q6ZSJ9	500 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	GLT6D1	Q7Z4J2	308 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	HOOK3	Q86VS8	718 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	MAP7D3	Q8IWC1	876 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	PARP9	Q8IXQ6	854 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	PHC3	Q8NDX5	983 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	ACVR1C	Q8NER5	493 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	IPMK	Q8NFU5	416 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	OR52E1	Q8NGJ3	308 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	OR2L2	Q8NH16	312 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	PPP4R1	Q8TF05	950 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	FAR1	Q8WVX9	515 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	TADA1	Q96BN2	335 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	RNF157	Q96PX1	679 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	CDK15	Q96Q40	435 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	C17orf62	Q9BQA9	187 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	DPH2	Q9BQC3	489 aa	Predicted RBP	7.57	□□□□□ -1.2
NVL-223	ENST00000496393	PITPNM3	Q9BZ71	974 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	RUBCNL	Q9H714	662 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	SYTL2	Q9HCH5	934 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	TXLNG	Q9NUQ3	528 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	OLAH	Q9NV23	265 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	ANO10	Q9NW15	660 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	ACTR10	Q9NZ32	417 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	IL17C	Q9P0M4	197 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	TMEM63C	Q9P1W3	806 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	CDC23	Q9UJX2	597 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	ACSL5	Q9ULC5	683 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	COLEC10	Q9Y6Z7	277 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	DOCK10	Q96BY6	2186 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393	MYO7B	Q6PIF6	2116 aa		7.57	□□□□□ -1.2
NVL-223	ENST00000496393		A0A087X0T9	212 aa		7.56	□□□□□ -1.2
NVL-223	ENST00000496393		A0A1B0GUH1	482 aa		7.56	□□□□□ -1.2
NVL-223	ENST00000496393		A0A1W2PQJ5	194 aa		7.56	□□□□□ -1.2
NVL-223	ENST00000496393	CFAP99	D6REC4	459 aa		7.56	□□□□□ -1.2
NVL-223	ENST00000496393	AGPS	O00116	658 aa		7.56	□□□□□ -1.2
NVL-223	ENST00000496393	APOL1	O14791	398 aa		7.56	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms