RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 DNAJC21Q5F1R6 531 aaKnown RBP15.26■□□□□ 0.03
HDAC4-213ENST00000496347 PWWP2BQ6NUJ5 590 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 TBC1D21Q8IYX1 336 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 PRELID2Q8N945 189 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 OR5K2Q8NHB8 316 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 NAP1L3Q99457 506 aaPredicted RBP15.26■□□□□ 0.03
HDAC4-213ENST00000496347 GEMIN8Q9NWZ8 242 aaKnown RBP15.26■□□□□ 0.03
HDAC4-213ENST00000496347 OR6C2Q9NZP2 312 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 POLG2Q9UHN1 485 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 ASF1AQ9Y294 204 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 PRMT5O14744 637 aaPredicted RBP15.25■□□□□ 0.03
HDAC4-213ENST00000496347 PRKAR1AP10644 381 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 TCN2P20062 427 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 POLE2P56282 527 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 SEMA3AQ14563 771 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 TMED2Q15363 201 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 LRRC8BQ6P9F7 803 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 LRRC6Q86X45 466 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 TMEM126BQ8IUX1 230 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 SLC22A15Q8IZD6 547 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 RASGEF1CQ8N431 466 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 OR5AR1Q8NGP9 310 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 ASZ1Q8WWH4 475 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 SEC14L1Q92503 715 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 ZNF501Q96CX3 271 aaPredicted RBP15.25■□□□□ 0.03
HDAC4-213ENST00000496347 KIFC1Q9BW19 673 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 FAM117AQ9C073 453 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 LHX9Q9NQ69 397 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 CHRAC1Q9NRG0 131 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 ANAPC5Q9UJX4 755 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 PADI1Q9ULC6 663 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 TTC7AQ9ULT0 858 aaPredicted RBP15.25■□□□□ 0.03
HDAC4-213ENST00000496347 ICKQ9UPZ9 632 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 PCDHB3Q9Y5E6 796 aa15.25■□□□□ 0.03
HDAC4-213ENST00000496347 ASH1LQ9NR48 2969 aaKnown RBP15.25■□□□□ 0.03
HDAC4-213ENST00000496347 BHMG1C9JSJ3 638 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-213ENST00000496347 BTN3A3O00478 584 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 NKX2-8O15522 239 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 SCRG1O75711 98 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 RPN2P04844 631 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 APOA4P06727 396 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 OAS2P29728 719 aaKnown RBP15.24■□□□□ 0.03
HDAC4-213ENST00000496347 PRDX3P30048 256 aaKnown RBP15.24■□□□□ 0.03
HDAC4-213ENST00000496347 KCNJ1P48048 391 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 NPY2RP49146 381 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 CRADDP78560 199 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 SARNPP82979 210 aaKnown RBP15.24■□□□□ 0.03
HDAC4-213ENST00000496347 PRKG2Q13237 762 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 DNASE1L3Q13609 305 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 KCNJ11Q14654 390 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 GPR19Q15760 415 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 RNF187Q5TA31 235 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-213ENST00000496347 SPESP1Q6UW49 350 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 ADGRF3Q8IZF5 1079 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 PBKQ96KB5 322 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 PPM1MQ96MI6 270 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 LRFN5Q96NI6 719 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 CARD6Q9BX69 1037 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 GPR87Q9BY21 358 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 GRPEL1Q9HAV7 217 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 ACTR10Q9NZ32 417 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 GNPTGQ9UJJ9 305 aa15.24■□□□□ 0.03
HDAC4-213ENST00000496347 FLNBO75369 2602 aaKnown RBP15.24■□□□□ 0.03
HDAC4-213ENST00000496347 UBR5O95071 2799 aaPredicted RBP15.23■□□□□ 0.03
HDAC4-213ENST00000496347 SLC9B1P1A6NJY1 282 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 PGRMC1O00264 195 aaKnown RBP15.23■□□□□ 0.03
HDAC4-213ENST00000496347 CD3EAPO15446 510 aaKnown RBP15.23■□□□□ 0.03
HDAC4-213ENST00000496347 RECKO95980 971 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 ITGB6P18564 788 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 RPS3P23396 243 aaKnown RBP eCLIP15.23■□□□□ 0.03
HDAC4-213ENST00000496347 F8A1P23610 371 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 CCR7P32248 378 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 NFATC3Q12968 1075 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 KCNAB2Q13303 367 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 CYP1B1Q16678 543 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 MRNIPQ6NTE8 343 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 UNC5DQ6UXZ4 953 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 DCUN1D3Q8IWE4 304 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 PHC3Q8NDX5 983 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 CT55Q8WUE5 264 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 APOBEC4Q8WW27 367 aaKnown RBP15.23■□□□□ 0.03
HDAC4-213ENST00000496347 CPT1BQ92523 772 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 PANX3Q96QZ0 392 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 AP1M1Q9BXS5 423 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 TWSG1Q9GZX9 223 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 CHRNA10Q9GZZ6 450 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 SLC25A18Q9H1K4 315 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 KCND1Q9NSA2 647 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 SYBUQ9NX95 663 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 MARCH4Q9P2E8 410 aaPredicted RBP15.23■□□□□ 0.03
HDAC4-213ENST00000496347 SOX13Q9UN79 622 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 FER1L5A0AVI2 2057 aa15.23■□□□□ 0.03
HDAC4-213ENST00000496347 GOLGA6L10A0A0M3HER8 536 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 PIPSLA2A3N6 862 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 TMEM150CB9EJG8 249 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 PFDN6O15212 129 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 GPC4O75487 556 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 SLCO2B1O94956 709 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 CHRM5P08912 532 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-213ENST00000496347 ST6GAL1P15907 406 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms