RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SPPL2CQ8IUH8 684 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 DMRTC2Q8IXT2 367 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 GPR150Q8NGU9 434 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 SUN3Q8TAQ9 357 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 PROKR1Q8TCW9 393 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 FAM172AQ8WUF8 416 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 RXFP2Q8WXD0 754 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 N4BP2L2Q92802 583 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 NUDCD1Q96RS6 583 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 AP1M1Q9BXS5 423 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 SLC39A8Q9C0K1 460 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 ARFGAP3Q9NP61 516 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 RRAGDQ9NQL2 400 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 FAM207AQ9NSI2 230 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 SEPT11Q9NVA2 429 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 SLC23A2Q9UGH3 650 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 GTF2A1LQ9UNN4 478 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 DYRK1BQ9Y463 629 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 C17orf113A0A1B0GUU1 675 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 SERTM1A2A2V5 107 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 A6NHS1 94 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 LY6G6DO95868 133 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 MSL3P1P0C860 447 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 CBSLP0DN79 551 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 MYBL2P10244 700 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 ABOP16442 354 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 CDH5P33151 784 aaPredicted RBP9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 RFC1P35251 1148 aaPredicted RBP9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 CBSP35520 551 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 SPAM1P38567 509 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 SYKP43405 635 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 KPNA2P52292 529 aaKnown RBP9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 IL10RBQ08334 325 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 PRKAA1Q13131 559 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 CUL4AQ13619 759 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZNF569Q5MCW4 686 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 HENMT1Q5T8I9 393 aaKnown RBP9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 Q6ZPB1 254 aaPredicted RBP9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 ALDH16A1Q8IZ83 802 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 VWA5B2Q8N398 1253 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 BBS5Q8N3I7 341 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 GPT2Q8TD30 523 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 AGAP11Q8TF27 550 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 MBD6Q96DN6 1003 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 LIME1Q9H400 295 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 NOD2Q9HC29 1040 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 C1GALT1Q9NS00 363 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 TXLNGQ9NUQ3 528 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 RMND1Q9NWS8 449 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 PLA2G3Q9NZ20 509 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 FOXD3Q9UJU5 478 aaPredicted RBP9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 CDYLQ9Y232 598 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZNF835Q9Y2P0 537 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 PPIL1Q9Y3C6 166 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 HRH3Q9Y5N1 445 aa9.27□□□□□ -0.93
SMARCAL1-213ENST00000496037 ANK2Q01484 3957 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 GSAPA4D1B5 854 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 OR6C74A6NCV1 312 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 FAM90A27PA6NNH2 459 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 E9PLN8 166 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 FAM227AF5H4B4 570 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 CHUKO15111 745 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 KLHL18O94889 574 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZRANB2O95218 330 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 SLC25A14O95258 325 aaPredicted RBP9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 PTMAP06454 111 aaKnown RBP9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 IL4RP24394 825 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 PTPN9P43378 593 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 HTR3AP46098 478 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 SLC10A7Q0GE19 358 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 BECN1Q14457 450 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZNF648Q5T619 568 aaPredicted RBP9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 SCYL2Q6P3W7 929 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 TRIM65Q6PJ69 517 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 SPATC1Q76KD6 591 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 PHC2Q8IXK0 858 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 GOLM1Q8NBJ4 401 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 PHC3Q8NDX5 983 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 CCDC110Q8TBZ0 833 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZFPM2Q8WW38 1151 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 PIH1D2Q8WWB5 315 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 PPM1MQ96MI6 270 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 GPR137Q96N19 417 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 VKORC1Q9BQB6 163 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 SCAND2PQ9GZW5 306 aaPredicted RBP9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 CLEC4MQ9H2X3 399 aaPredicted RBP9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 FAM83DQ9H4H8 585 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 MRM3Q9HC36 420 aaKnown RBP9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 TRIM39Q9HCM9 518 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 PKD2L2Q9NZM6 624 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 APEX2Q9UBZ4 518 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 WDR37Q9Y2I8 494 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 MRPS2Q9Y399 296 aaKnown RBP9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 AP1M2Q9Y6Q5 423 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 CNTRLQ7Z7A1 2325 aa9.26□□□□□ -0.93
SMARCAL1-213ENST00000496037 NUP210LQ5VU65 1888 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 A0A0J9YYE9 177 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 FAM237BA0A1B0GVD1 139 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 FAM181BA6NEQ2 426 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms