RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 RAI2Q9Y5P3 530 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 PTPRBP23467 1997 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 GOLGA6L7A0A1B0GV03 622 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 GTPBP10A4D1E9 387 aaKnown RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 FAM47DPA6NHR8 397 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 YJEFN3A6XGL0 299 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 E7ENQ6 273 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 E9PAM4 449 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 VILLO15195 856 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 P4HA2O15460 535 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 DFNA5O60443 496 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 PMPCBO75439 489 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 LDOC1O95751 146 aaPredicted RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 ATP5BP06576 529 aaKnown RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 DLDP09622 509 aaKnown RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 GPD1P21695 349 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 GABRB3P28472 473 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 GKP32189 559 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 CD70P32970 193 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 PBX1P40424 430 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 EIF2S3P41091 472 aaKnown RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 HARS2P49590 506 aaKnown RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 GALCP54803 685 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 C21orf59P57076 290 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 POLR2FP61218 127 aaKnown RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 SEMG2Q02383 582 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 MPEG1Q2M385 716 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 FAXCQ5TGI0 409 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 BSPRYQ5W0U4 402 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 RAP1GAP2Q684P5 730 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 ZNF776Q68DI1 518 aaPredicted RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 SPECC1LQ69YQ0 1117 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 DPY19L2P1Q6NXN4 242 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 RFWD3Q6PCD5 774 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 SLC29A4Q7RTT9 530 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 VSTM4Q8IW00 320 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 FSTL5Q8N475 847 aaPredicted RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 SIRT6Q8N6T7 355 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 BOLLQ8N9W6 283 aaKnown RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 ANKRD52Q8NB46 1076 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 GLIS1Q8NBF1 620 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 ABHD11Q8NFV4 315 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 WFDC5Q8TCV5 224 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 SAP25Q8TEE9 199 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 GANCQ8TET4 914 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 CNDP2Q96KP4 475 aaKnown RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 LMLNQ96KR4 655 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 LENG8Q96PV6 779 aaPredicted RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 RSPH9Q9H1X1 276 aaPredicted RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 NEUROG2Q9H2A3 272 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 PRORYQ9H606 182 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 LRRC4Q9HBW1 653 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 ARFGAP3Q9NP61 516 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 SIX2Q9NPC8 291 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 FAM207AQ9NSI2 230 aaPredicted RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 FBXL12Q9NXK8 326 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 SH3BP4Q9P0V3 963 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 C11orf21Q9P2W6 132 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 SERGEFQ9UGK8 458 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 SUN2Q9UH99 717 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 DNAJC12Q9UKB3 198 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 HBS1LQ9Y450 684 aaKnown RBP6.52□□□□□ -1.37
VIM-207ENST00000495528 PCDHGA1Q9Y5H4 931 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.52□□□□□ -1.37
VIM-207ENST00000495528 ITPR1Q14643 2758 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 IGSF10Q6WRI0 2623 aa6.52□□□□□ -1.37
VIM-207ENST00000495528 A0A1W2PR77 199 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 XPO1O14980 1071 aaKnown RBP6.51□□□□□ -1.37
VIM-207ENST00000495528 EPHB6O15197 1021 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 MID1O15344 667 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 MSI1O43347 362 aaKnown RBP6.51□□□□□ -1.37
VIM-207ENST00000495528 TBL1XO60907 577 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 LATS1O95835 1130 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 POLR2EP19388 210 aaKnown RBP6.51□□□□□ -1.37
VIM-207ENST00000495528 FPR3P25089 353 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 CASP14P31944 242 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 USP8P40818 1118 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 ACADVLP49748 655 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 SUMO2P61956 95 aaKnown RBP6.51□□□□□ -1.37
VIM-207ENST00000495528 CYP4F2P78329 520 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 GPS1Q13098 491 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 GOLGA7BQ2TAP0 167 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 TBC1D25Q3MII6 688 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 TTC31Q49AM3 519 aaPredicted RBP6.51□□□□□ -1.37
VIM-207ENST00000495528 AARS2Q5JTZ9 985 aaKnown RBP6.51□□□□□ -1.37
VIM-207ENST00000495528 FBXO42Q6P3S6 717 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 NCEH1Q6PIU2 408 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 TRIM65Q6PJ69 517 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 KIAA0408Q6ZU52 694 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 CCDC28AQ8IWP9 274 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 EID2Q8N6I1 236 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 VPS37AQ8NEZ2 397 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 RNF139Q8WU17 664 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 GOLGA1Q92805 767 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 NXPE2Q96DL1 559 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 C18orf8Q96DM3 657 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 SELENOOQ9BVL4 669 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 FSD1LQ9BXM9 530 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 DNAI2Q9GZS0 605 aa6.51□□□□□ -1.37
VIM-207ENST00000495528 PABPC3Q9H361 631 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms