RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 TRAPPC5Q8IUR0 188 aa13.19□□□□□ -0.3
GPC1-209ENST00000495100 P3H2Q8IVL5 708 aa13.19□□□□□ -0.3
GPC1-209ENST00000495100 BBS7Q8IWZ6 715 aa13.19□□□□□ -0.3
GPC1-209ENST00000495100 OR7A2PQ8NGA2 310 aa13.19□□□□□ -0.3
GPC1-209ENST00000495100 BCL7CQ8WUZ0 217 aaPredicted RBP13.19□□□□□ -0.3
GPC1-209ENST00000495100 TMEM125Q96AQ2 219 aa13.19□□□□□ -0.3
GPC1-209ENST00000495100 SLC39A13Q96H72 371 aa13.19□□□□□ -0.3
GPC1-209ENST00000495100 REXO5Q96IC2 774 aaKnown RBP13.19□□□□□ -0.3
GPC1-209ENST00000495100 COPS8Q99627 209 aa13.19□□□□□ -0.3
GPC1-209ENST00000495100 HIPK3Q9H422 1215 aa13.19□□□□□ -0.3
GPC1-209ENST00000495100 TRNAU1APQ9NX07 287 aaKnown RBP13.19□□□□□ -0.3
GPC1-209ENST00000495100 RHCGQ9UBD6 479 aa13.19□□□□□ -0.3
GPC1-209ENST00000495100 DAPK2Q9UIK4 370 aa13.19□□□□□ -0.3
GPC1-209ENST00000495100 FXYD1O00168 92 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 KRT6AP02538 564 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 KRT6BP04259 564 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 PGRP06401 933 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 CAPGP40121 348 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 KRT6CP48668 564 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 SREBF2Q12772 1141 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 CHIT1Q13231 466 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 GPR17Q13304 367 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 PTCHD3Q3KNS1 767 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 CES5AQ6NT32 575 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 ADAMTSL2Q86TH1 951 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 LRRC49Q8IUZ0 686 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 LILRA3Q8N6C8 439 aaPredicted RBP13.18□□□□□ -0.3
GPC1-209ENST00000495100 OR4K1Q8NGD4 311 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 UROC1Q96N76 676 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 LRRC3Q9BY71 257 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 ZDHHC7Q9NXF8 308 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 CEPT1Q9Y6K0 416 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 ELOVL7A1L3X0 281 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 MGAT4DA6NG13 374 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 CXCR6O00574 342 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 RGS5O15539 181 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 FAM20BO75063 409 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 ANXA5P08758 320 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 PRIM2P49643 509 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 ARF5P84085 180 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 CAP1Q01518 475 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 KCNAB2Q13303 367 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 LRRC66Q68CR7 880 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 Q6ZVL8 140 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 PLD3Q8IV08 490 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 HID1Q8IV36 788 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 CHERPQ8IWX8 916 aaKnown RBP13.18□□□□□ -0.3
GPC1-209ENST00000495100 EID3Q8N140 333 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 GANCQ8TET4 914 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 ROPN1LQ96C74 230 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 RHNO1Q9BSD3 238 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 C2orf49Q9BVC5 232 aaPredicted RBP13.18□□□□□ -0.3
GPC1-209ENST00000495100 ASPSCR1Q9BZE9 553 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 TPK1Q9H3S4 243 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 MARCH7Q9H992 704 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 ABCB10Q9NRK6 738 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 PDP1Q9P0J1 537 aaPredicted RBP13.18□□□□□ -0.3
GPC1-209ENST00000495100 OAS3Q9Y6K5 1087 aaKnown RBP13.18□□□□□ -0.3
GPC1-209ENST00000495100 USP34Q70CQ2 3546 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 MROH6A6NGR9 719 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 H0Y858 1186 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 PER2O15055 1255 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 DGKAP23743 735 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 EPHB3P54753 998 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 ACSM2AQ08AH3 577 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 DNASE1L3Q13609 305 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 TP53BP2Q13625 1128 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 MANEALQ5VSG8 457 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 ACSM2BQ68CK6 577 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 ADNP2Q6IQ32 1131 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 SUSD1Q6UWL2 747 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 GPR180Q86V85 440 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 TBC1D21Q8IYX1 336 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 CLECL1Q8IZS7 167 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 CACTIN-AS1Q8N1I8 211 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 TMEM199Q8N511 208 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 ZBTB2Q8N680 514 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 SMYD1Q8NB12 490 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 HTRA1Q92743 480 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 MAF1Q9H063 256 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 SDR39U1Q9NRG7 319 aaPredicted RBP13.18□□□□□ -0.3
GPC1-209ENST00000495100 DLGAP4Q9Y2H0 992 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 COQ6Q9Y2Z9 468 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 SEC16AO15027 2179 aa13.18□□□□□ -0.3
GPC1-209ENST00000495100 A0A1W2PQ45 241 aaPredicted RBP13.17□□□□□ -0.3
GPC1-209ENST00000495100 A0A1W2PQY0 241 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 TMEM247A6NEH6 219 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 H7C4K7 107 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 CCNA2P20248 432 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 CD70P32970 193 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 SHMT2P34897 504 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 BNIP2Q12982 314 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 ACOX1Q15067 660 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 TMEM236Q5W0B7 351 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 PRMT9Q6P2P2 845 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 APLFQ8IW19 511 aaPredicted RBP13.17□□□□□ -0.3
GPC1-209ENST00000495100 PSMA8Q8TAA3 256 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 ISL2Q96A47 359 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 ZNF599Q96NL3 588 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 CERS4Q9HA82 394 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms