RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 S100BP04271 92 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 RPN2P04844 631 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 CELA2BP08218 269 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 FGF3P11487 239 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 NEFHP12036 1026 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 CTSEP14091 401 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 NCF1P14598 390 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 BGNP21810 368 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 MAP4P27816 1152 aaKnown RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 RPIAP49247 311 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 PRKAA2P54646 552 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 ALDH18A1P54886 795 aaKnown RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 AP1S2P56377 157 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 DNAJB13P59910 316 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 BNC1Q01954 994 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 ASPHQ12797 758 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 CHI3L2Q15782 390 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 KIF19Q2TAC6 998 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 UAP1L1Q3KQV9 507 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 PRRT3Q5FWE3 981 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 CDKL4Q5MAI5 379 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 LIPMQ5VYY2 423 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 ABRAXAS1Q6UWZ7 409 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 PRR23BQ6ZRT6 265 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 RABEPKQ7Z6M1 372 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 SLC22A9Q8IVM8 553 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 DCUN1D3Q8IWE4 304 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 TRIM42Q8IWZ5 723 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 FBXO39Q8N4B4 442 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 PTGR2Q8N8N7 351 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 MCOLN3Q8TDD5 553 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 LRRC8CQ8TDW0 803 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 TFGQ92734 400 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 PHF21BQ96EK2 531 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 MAGEB18Q96M61 343 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 C12orf66Q96MD2 445 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 CCDC134Q9H6E4 229 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 ERVMER34-1Q9H9K5 563 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 NCKIPSDQ9NZQ3 722 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 TAAR2Q9P1P5 351 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 ADAM21Q9UKJ8 722 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 PCOLCE2Q9UKZ9 415 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 ASF1AQ9Y294 204 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 GON4LQ3T8J9 2241 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 SPAG17Q6Q759 2223 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 STX16-NPEPL1H3BU86 382 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 MYO1CO00159 1063 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 STX16O14662 325 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 KLF11O14901 512 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 EML2O95834 649 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 GUCA1CO95843 209 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 SERPINE1P05121 402 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 HIST1H2AGP0C0S8 130 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-231ENST00000494043 MTHFD1P11586 935 aaKnown RBP11.11□□□□□ -0.63
MCF2L-231ENST00000494043 HIST1H2ADP20671 130 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 HALP42357 657 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 HNRNPKP61978 463 aaKnown RBP eCLIP11.11□□□□□ -0.63
MCF2L-231ENST00000494043 HERVK_113P63132 956 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 GNGT1P63211 74 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 C1orf61Q13536 156 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 CLCA4Q14CN2 919 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 SETDB1Q15047 1291 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 ELOCQ15369 112 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 RPE65Q16518 533 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 PFKFB4Q16877 469 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 DUOXA1Q1HG43 343 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 TUBB8Q3ZCM7 444 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 CCSMST1Q4G0I0 132 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 SULT1C3Q6IMI6 304 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 DUS1LQ6P1R4 473 aaKnown RBP11.11□□□□□ -0.63
MCF2L-231ENST00000494043 MBOAT1Q6ZNC8 495 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 RGS9BPQ6ZS82 235 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 ZCCHC23Q6ZST2 131 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 RAB44Q7Z6P3 723 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-231ENST00000494043 TAF8Q7Z7C8 310 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 TBC1D21Q8IYX1 336 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 OR5AR1Q8NGP9 310 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 OR6Y1Q8NGX8 325 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 OR5K2Q8NHB8 316 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 PPP1R14CQ8TAE6 165 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 CEP76Q8TAP6 659 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 UBTD2Q8WUN7 234 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 ZNF75CPQ92670 426 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-231ENST00000494043 RHBDF1Q96CC6 855 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 L3HYPDHQ96EM0 354 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 HIST1H2AHQ96KK5 128 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 TMEM237Q96Q45 408 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 INSM2Q96T92 566 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-231ENST00000494043 HIST1H2AJQ99878 128 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 EGFL8Q99944 293 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 H2AFJQ9BTM1 129 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 GATA5Q9BWX5 397 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-231ENST00000494043 ERVK-6Q9BXR3 956 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 TRIT1Q9H3H1 467 aaKnown RBP11.11□□□□□ -0.63
MCF2L-231ENST00000494043 MANSC1Q9H8J5 431 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 IMP3Q9NV31 184 aaKnown RBP11.11□□□□□ -0.63
MCF2L-231ENST00000494043 ARL15Q9NXU5 204 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 SCHIP1Q9P0W5 487 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-231ENST00000494043 SPASTQ9UBP0 616 aa11.11□□□□□ -0.63
MCF2L-231ENST00000494043 PTBP2Q9UKA9 531 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms