RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	LYPLAL1	Q5VWZ2	237 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	PPP1R32	Q7Z5V6	425 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	AMIGO1	Q86WK6	493 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	TTC13	Q8NBP0	860 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	CLEC1A	Q8NC01	280 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	DCUN1D1	Q96GG9	259 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	GBP5	Q96PP8	586 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	CHP1	Q99653	195 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	HGH1	Q9BTY7	390 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	DHRS4	Q9BTZ2	278 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	FSD1L	Q9BXM9	530 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	COG4	Q9H9E3	785 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	DDX56	Q9NY93	547 aa	Known RBP	13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	ACTR10	Q9NZ32	417 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	CRLS1	Q9UJA2	301 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	PADI2	Q9Y2J8	665 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	ABCA12	Q86UK0	2595 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	KLHL33	A6NCF5	533 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	C2orf81	A6NN90	581 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	C2orf74	A8MZ97	194 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	OR2B3	O76000	313 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	PRSS56	P0CW18	603 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	TPBGL	P0DKB5	382 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	PYGM	P11217	842 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	ATP1B2	P14415	290 aa	Predicted RBP	13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	POU3F2	P20265	443 aa	Predicted RBP	13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	ADRA1A	P35348	466 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	FOLR3	P41439	243 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	BOP1	Q14137	746 aa	Known RBP	13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	TFDP2	Q14188	446 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	ELOA	Q14241	798 aa	Known RBP	13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	SPESP1	Q6UW49	350 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	RANBP10	Q6VN20	620 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161		Q6ZS92	163 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	BZW1	Q7L1Q6	419 aa	Known RBP	13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	NXPE1	Q8N323	547 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	C19orf47	Q8N9M1	422 aa	Known RBP	13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	UBE2Q2	Q8WVN8	375 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	P3H4	Q92791	437 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	IQCD	Q96DY2	449 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	FER1L6-AS2	Q96M78	137 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	OR2A14	Q96R47	310 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	DNAJC7	Q99615	494 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	GOLPH3	Q9H4A6	298 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	SPHK1	Q9NYA1	384 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	ICK	Q9UPZ9	632 aa		13.23	□□□□□ -0.29
SAMM50-204	ENST00000493161	CSMD1	Q96PZ7	3565 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	hCG_1818297	A0A087WSY0	165 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	C17orf113	A0A1B0GUU1	675 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	PEX12	O00623	359 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	LRRTM2	O43300	516 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	AKR1B10	O60218	316 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	ALPP	P05187	535 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	HBQ1	P09105	142 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	UGT2B7	P16662	529 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	RBL1	P28749	1068 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	MARCKSL1	P49006	195 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	ZNF140	P52738	457 aa	Predicted RBP	13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	DCD	P81605	110 aa	Known RBP	13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	HIF1A	Q16665	826 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	RHBDD2	Q6NTF9	364 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	MRPL14	Q6P1L8	145 aa	Known RBP	13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	UNC5A	Q6ZN44	842 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	KCNMB4	Q86W47	210 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	GPR135	Q8IZ08	494 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	ZADH2	Q8N4Q0	377 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	CLDN19	Q8N6F1	224 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	ZNF655	Q8N720	491 aa	Predicted RBP	13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	OR5AR1	Q8NGP9	310 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	OR2Y1	Q8NGV0	311 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	FLVCR1-AS1	Q8TAF5	88 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	TFG	Q92734	400 aa	Predicted RBP	13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	IP6K3	Q96PC2	410 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	VAT1	Q99536	393 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	COPS8	Q99627	209 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	GBA3	Q9H227	469 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	MVB12B	Q9H7P6	319 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	SLC22A11	Q9NSA0	550 aa		13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	IFT80	Q9P2H3	777 aa	Predicted RBP	13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	GPN3	Q9UHW5	284 aa	Predicted RBP	13.22	□□□□□ -0.29
SAMM50-204	ENST00000493161	ARHGAP10	A1A4S6	786 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	C5orf60	A6NFR6	353 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	IFRD1	O00458	451 aa	Predicted RBP	13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	E2F3	O00716	465 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	MAP3K7	O43318	606 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	SPOP	O43791	374 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	RALB	P11234	206 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	ITGAX	P20702	1163 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	SLC1A1	P43005	524 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	GEM	P55040	296 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	SOX8	P57073	446 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	SPARCL1	Q14515	664 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	NKAIN1	Q4KMZ8	207 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	DENND5A	Q6IQ26	1287 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	SARM1	Q6SZW1	724 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	RHOT2	Q8IXI1	618 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	FAM20C	Q8IXL6	584 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	ST6GALNAC3	Q8NDV1	305 aa		13.21	□□□□□ -0.29
SAMM50-204	ENST00000493161	OR8K1	Q8NGG5	319 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms