RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 ILKAPQ9H0C8 392 aaPredicted RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 PARVBQ9HBI1 364 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 FGF22Q9HCT0 170 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 SEMA4BQ9NPR2 832 aaPredicted RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 OPTCQ9UBM4 332 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 DCTN4Q9UJW0 460 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 DOLKQ9UPQ8 538 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 CFAP20Q9Y6A4 193 aaKnown RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 DNMT3AQ9Y6K1 912 aaPredicted RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 A0A0G2JND7 137 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 KLHL33A6NCF5 533 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 LRRC14BA6NHZ5 514 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 METTL12A8MUP2 240 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 ARHGEF33A8MVX0 844 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 STX16-NPEPL1H3BU86 382 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 K7ESF4 209 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 STX16O14662 325 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 HGSO14964 777 aaPredicted RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 CLGNO14967 610 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 SKAP2O75563 359 aaPredicted RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 SLCO2B1O94956 709 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 WDR47O94967 919 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 CEACAM5P06731 702 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 CHRNGP07510 517 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 SBK3P0C264 359 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 IMPDH1P20839 514 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 CD27P26842 260 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 AK4P27144 223 aaPredicted RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 CD38P28907 300 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 SERPINB5P36952 375 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 AGTR2P50052 363 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 CCNG1P51959 295 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 HK3P52790 923 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 ARFIP2P53365 341 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 CDH13P55290 713 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 AP1S2P56377 157 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 PFN3P60673 137 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 NAA20P61599 178 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 HERVK_113P63132 956 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 CLCQ05315 142 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 ILF3Q12906 894 aaKnown RBP eCLIP7.85□□□□□ -1.15
FDPS-218ENST00000492887 PRKAA1Q13131 559 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 BIRC2Q13490 618 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 GTF2H2Q13888 395 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 GBX1Q14549 363 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 PDCD2Q16342 344 aaPredicted RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 PHKG1Q16816 387 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 C18orf21Q32NC0 220 aaPredicted RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 PYCR3Q53H96 274 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 UNC50Q53HI1 259 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 ZNF542PQ5EBM4 170 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 WDR45BQ5MNZ6 344 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 SH2D4BQ5SQS7 431 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 THEMIS2Q5TEJ8 643 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 GTF2H2CQ6P1K8 395 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 DUS1LQ6P1R4 473 aaKnown RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 SLC30A9Q6PML9 568 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 LAYNQ6UX15 382 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 CYHR1Q6ZMK1 362 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 FAM83HQ6ZRV2 1179 aaPredicted RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 RPS27LQ71UM5 84 aaKnown RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 CUZD1Q86UP6 607 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 PDZD3Q86UT5 571 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 MYLK4Q86YV6 388 aaPredicted RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 ZNF547Q8IVP9 402 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 SYTL1Q8IYJ3 562 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 OXR1Q8N573 874 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 TEX9Q8N6V9 391 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 EFCAB3Q8N7B9 438 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 ZNF781Q8N8C0 355 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 PDPRQ8NCN5 879 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 FAM174AQ8TBP5 190 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 TRPC4APQ8TEL6 797 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 ATL1Q8WXF7 558 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 CCT6BQ92526 530 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 SKA1Q96BD8 255 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 L3HYPDHQ96EM0 354 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 CNDP1Q96KN2 507 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 BMFQ96LC9 184 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 PPP1R36Q96LQ0 422 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 RMDN2Q96LZ7 410 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 C7orf26Q96N11 449 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 RILPQ96NA2 401 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 ERVK-6Q9BXR3 956 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 GSDMCQ9BYG8 508 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 DRC3Q9H069 523 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 PCED1AQ9H1Q7 454 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 TRIT1Q9H3H1 467 aaKnown RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 DPEP2Q9H4A9 486 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 ZNF395Q9H8N7 513 aaPredicted RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 EBF2Q9HAK2 575 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 MID1IP1Q9NPA3 183 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 IMP3Q9NV31 184 aaKnown RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 PNPOQ9NVS9 261 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 DNAJC28Q9NX36 388 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.85□□□□□ -1.15
FDPS-218ENST00000492887 KLHL14Q9P2G3 628 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 SLC23A2Q9UGH3 650 aa7.85□□□□□ -1.15
FDPS-218ENST00000492887 ACSL5Q9ULC5 683 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms