RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CHID1Q9BWS9 393 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 EBPLQ9BY08 206 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 CD244Q9BZW8 370 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 HPS4Q9NQG7 708 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 ZIM2Q9NZV7 527 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 OARD1Q9Y530 152 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 KIAA1671Q9BY89 1806 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 ATG2BQ96BY7 2078 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 ZBBXA8MT70 800 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 AREL1O15033 823 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 H6PDO95479 791 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 DGKAP23743 735 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 ARHGEF6Q15052 776 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 ADNP2Q6IQ32 1131 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 MSRB3Q8IXL7 192 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 TRPV3Q8NET8 790 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 DUS3LQ96G46 650 aaKnown RBP12.19□□□□□ -0.46
HMGN1-220ENST00000492280 HERC2P3Q9BVR0 1158 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 TRIM15Q9C019 465 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 ACTR8Q9H981 624 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 HEBP1Q9NRV9 189 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 SLC25A37Q9NYZ2 338 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 TRIOO75962 3097 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 SPEGQ15772 3267 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 HIDE1A8MVS5 230 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 H3BNH8 94 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 HNRNPRO43390 633 aaKnown RBP12.18□□□□□ -0.46
HMGN1-220ENST00000492280 PDYNP01213 254 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 C1SP09871 688 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 SLC5A2P31639 672 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 RPIAP49247 311 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 RPL26P61254 145 aaKnown RBP12.18□□□□□ -0.46
HMGN1-220ENST00000492280 WDR5P61964 334 aaKnown RBP12.18□□□□□ -0.46
HMGN1-220ENST00000492280 MERTKQ12866 999 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 DDX39BQ13838 428 aaKnown RBP12.18□□□□□ -0.46
HMGN1-220ENST00000492280 LAPTM4AQ15012 233 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 CNKSR3Q6P9H4 555 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 CERS6Q6ZMG9 384 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 HID1Q8IV36 788 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 SLC13A3Q8WWT9 602 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 ISG20Q96AZ6 181 aaKnown RBP12.18□□□□□ -0.46
HMGN1-220ENST00000492280 CENPNQ96H22 339 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-220ENST00000492280 NSMCE2Q96MF7 247 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 LRRC3Q9BY71 257 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 ANKRD60Q9BZ19 345 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 ACPTQ9BZG2 426 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 CNOT11Q9UKZ1 510 aaKnown RBP12.18□□□□□ -0.46
HMGN1-220ENST00000492280 PDE10AQ9Y233 779 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 MYRFQ9Y2G1 1151 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 SMIM31A0A1B0GVY4 71 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 PRAMEF4O60810 478 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 ULK1O75385 1050 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 FGF18O76093 207 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 GLUD1P00367 558 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 PHC1P78364 1004 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 EMX2Q04743 252 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 CBX2Q14781 532 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-220ENST00000492280 ATP6AP1Q15904 470 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 PRAMEF9Q5VWM5 478 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 GCNT7Q6ZNI0 430 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 NCSTNQ92542 709 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 SGCDQ92629 289 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 ZNF689Q96CS4 500 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-220ENST00000492280 RC3H2Q9HBD1 1191 aaKnown RBP12.18□□□□□ -0.46
HMGN1-220ENST00000492280 PNPLA3Q9NST1 481 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 TBX21Q9UL17 535 aa12.18□□□□□ -0.46
HMGN1-220ENST00000492280 TRBV5-4A0A0C4DH59 114 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 K7EPI3 171 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 NOBOXO60393 691 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 STK16O75716 305 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 ENO2P09104 434 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-220ENST00000492280 EPB42P16452 691 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 SLC14A1Q13336 389 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 TTC33Q6PID6 262 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-220ENST00000492280 ZNF783Q6ZMS7 281 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 UBE2R2Q712K3 238 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-220ENST00000492280 EFL1Q7Z2Z2 1120 aaKnown RBP12.17□□□□□ -0.46
HMGN1-220ENST00000492280 ING5Q8WYH8 240 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 NCLNQ969V3 563 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 ACDQ96AP0 544 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 DGCR14Q96DF8 476 aaKnown RBP12.17□□□□□ -0.46
HMGN1-220ENST00000492280 COPS8Q99627 209 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 INPP5KQ9BT40 448 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 DPY30Q9C005 99 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 SUV39H2Q9H5I1 410 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 BRD9Q9H8M2 597 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 ZDHHC4Q9NPG8 344 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 EXD2Q9NVH0 621 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 KIAA1522Q9P206 1035 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-220ENST00000492280 OGDHLQ9ULD0 1010 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 VPS4AQ9UN37 437 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 TNPO3Q9Y5L0 923 aaKnown RBP12.17□□□□□ -0.46
HMGN1-220ENST00000492280 U3KQV3 271 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 MANBAO00462 879 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 FOXD2O60548 495 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-220ENST00000492280 WDR47O94967 919 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 ETV3P41162 512 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 CDKN2CP42773 168 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 CTBSQ01459 385 aa12.17□□□□□ -0.46
HMGN1-220ENST00000492280 PTPRSQ13332 1948 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms