RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PLIN3O60664 434 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 LYPLA1O75608 230 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 DKK1O94907 266 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 HLA-DPA1P20036 260 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 SPINK2P20155 84 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 PEX2P28328 305 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 CA5AP35218 305 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 AQP4P55087 323 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 CCNIQ14094 377 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 TRIP10Q15642 601 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 INSCQ1MX18 579 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 LRRC23Q53EV4 343 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 SFT2D3Q587I9 215 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 LPCAT4Q643R3 524 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 PDPK2PQ6A1A2 396 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 ADAMTSL4Q6UY14 1074 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 RAVER1Q8IY67 606 aaKnown RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 DRAXINQ8NBI3 349 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 CCL4L1Q8NHW4 92 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 BLOC1S5Q8TDH9 187 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 BTN2A2Q8WVV5 523 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 COX14Q96I36 57 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 ZNF778Q96MU6 729 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 FSD1LQ9BXM9 530 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 TMEM168Q9H0V1 697 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 CYP4F12Q9HCS2 524 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 PHPT1Q9NRX4 125 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 NLGN3Q9NZ94 848 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 SPASTQ9UBP0 616 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 ADAMTS6Q9UKP5 1117 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 AAR2Q9Y312 384 aaKnown RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 KCTD3Q9Y597 815 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 OAS3Q9Y6K5 1087 aaKnown RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 DGKBQ9Y6T7 804 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 COL27A1Q8IZC6 1860 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 PRSS38A1L453 326 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 PDLIM1O00151 329 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 TNFRSF10CO14798 259 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 CASQ2O14958 399 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-219ENST00000491747 YY2O15391 372 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 PDE5AO76074 875 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 RASGRP1O95267 797 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 TNFP01375 233 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 ALDOAP04075 364 aaKnown RBP9.23□□□□□ -0.93
BRCA1-219ENST00000491747 FGF1P05230 155 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 MLNP12872 115 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 ALOX15P16050 662 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-219ENST00000491747 PMLP29590 882 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 PRDX6P30041 224 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 IDH3AP50213 366 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 CHN2P52757 468 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 FOXC1Q12948 553 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 LSAMPQ13449 338 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 NAB1Q13506 487 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 SEMA5AQ13591 1074 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 PRPSAP1Q14558 356 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 PCLAFQ15004 111 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 INAVAQ3KP66 663 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 ANKRD20A4Q4UJ75 823 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 ZNF648Q5T619 568 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-219ENST00000491747 C16orf46Q6P387 395 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 CASC4Q6P4E1 433 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 DOK6Q6PKX4 331 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 RNF111Q6ZNA4 994 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 SFTPA2Q8IWL1 248 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 DEFB107AQ8IZN7 70 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 MPP5Q8N3R9 675 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 FBXW8Q8N3Y1 598 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 NAT14Q8WUY8 206 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 HIC2Q96JB3 615 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 APOLD1Q96LR9 279 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 TBL1YQ9BQ87 522 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 TRIM56Q9BRZ2 755 aaKnown RBP9.23□□□□□ -0.93
BRCA1-219ENST00000491747 EPB41L1Q9H4G0 881 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 SUDS3Q9H7L9 328 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-219ENST00000491747 IL17CQ9P0M4 197 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 TXNDC16Q9P2K2 825 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 MOSPD1Q9UJG1 213 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 TMPRSS11EQ9UL52 423 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 SLC17A4Q9Y2C5 497 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 PLEKHM1Q9Y4G2 1056 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 ARL5AQ9Y689 179 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 CSNK1G3Q9Y6M4 447 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 RGSL1A5PLK6 1076 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 TXNDC9O14530 226 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 TPP1O14773 563 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 NCF2P19878 526 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-219ENST00000491747 HMGCLP35914 325 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 TBL3Q12788 808 aaKnown RBP9.23□□□□□ -0.93
BRCA1-219ENST00000491747 DLG1Q12959 904 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 PDK3Q15120 406 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 STEAP4Q687X5 459 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 NRROSQ86YC3 692 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 CHCHD4Q8N4Q1 142 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 B4GALNT2Q8NHY0 566 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 TBATAQ96M53 351 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 NAT9Q9BTE0 207 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 Q9H521 79 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 PIH1D1Q9NWS0 290 aaKnown RBP9.23□□□□□ -0.93
BRCA1-219ENST00000491747 COPG2Q9UBF2 871 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms