RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 SLC45A3Q96JT2 553 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 SIGLEC10Q96LC7 697 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 C9orf72Q96LT7 481 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 TCF12Q99081 682 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 COPS8Q99627 209 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 EBNA1BP2Q99848 306 aaKnown RBP10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 TSSK1BQ9BXA7 367 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 SLC25A18Q9H1K4 315 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 TRIT1Q9H3H1 467 aaKnown RBP10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 GPN2Q9H9Y4 310 aaPredicted RBP10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 UCK1Q9HA47 277 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 UGT1A7Q9HAW7 530 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 UGT1A10Q9HAW8 530 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 UGT1A8Q9HAW9 530 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 SYBUQ9NX95 663 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 VPS9D1Q9Y2B5 631 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 RPS6KL1Q9Y6S9 549 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 FAM169AQ9Y6X4 670 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 TNRC6AQ8NDV7 1962 aaKnown RBP10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 NBPF19A0A087WUL8 3843 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 CCDC78A2IDD5 438 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 POLR1CO15160 346 aaPredicted RBP10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 NDUFS3O75489 264 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 UBXN7O94888 489 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 VAPBO95292 243 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 GOT2P00505 430 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 VIPP01282 170 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 GSTA2P09210 222 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 PGAM1P18669 254 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 MAP4P27816 1152 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 AKT1P31749 480 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 STAT5AP42229 794 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 CAPZBP47756 277 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 TTPAP49638 278 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 CRADDP78560 199 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 XIAPP98170 497 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 ACVR1Q04771 509 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 FOXM1Q08050 763 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 DHX9Q08211 1270 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 ILF2Q12905 390 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 PDIA2Q13087 525 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 CUL1Q13616 776 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 ANKRD20A4Q4UJ75 823 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 SPANXN3Q5MJ09 141 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 ABRAXAS1Q6UWZ7 409 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 FAM92BQ6ZTR7 304 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 TMEM135Q86UB9 458 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 PLXDC1Q8IUK5 500 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 TRAPPC5Q8IUR0 188 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 TRIM48Q8IWZ4 208 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 CNPY4Q8N129 248 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 OTUD6BQ8N6M0 293 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 RASGEF1AQ8N9B8 481 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 STARD8Q92502 1023 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 SEC14L1Q92503 715 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 CATSPER2Q96P56 530 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 VPS37BQ9H9H4 285 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 SLC40A1Q9NP59 571 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 SMOXQ9NWM0 555 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 ZDHHC3Q9NYG2 299 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 ANKMY1Q9P2S6 941 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 ZC3H7BQ9UGR2 993 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 LRRK2Q5S007 2527 aa10.76□□□□□ -0.69
TMEM39A-211ENST00000491685 CCDC162PA2VCL2 907 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 AGAP14A8MT82 685 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 CD3EAPO15446 510 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 TIAF1O95411 115 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 FURINP09958 794 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 RHOXF2BP0C7M4 288 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 ATP1B2P14415 290 aaPredicted RBP10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 NMBRP28336 390 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 PBLDP30039 288 aaPredicted RBP10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 ELK3P41970 407 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 NSG1P42857 185 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 MC1RQ01726 317 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 TLE1Q04724 770 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 ABHD18Q0P651 414 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 CBLBQ13191 982 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 NFE2L1Q14494 772 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 ITIH4Q14624 930 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 LONRF1Q17RB8 773 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 DEFB109BQ30KR1 87 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 FNBP1LQ5T0N5 605 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 AGAP9Q5VTM2 703 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 KIAA0930Q6ICG6 404 aaPredicted RBP10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 NEPROQ6NW34 567 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 DUS1LQ6P1R4 473 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 WDR93Q6P2C0 686 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 C16orf46Q6P387 395 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 ZNF534Q76KX8 674 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 PRSS42Q7Z5A4 293 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 NXPE1Q8N323 547 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 MPP5Q8N3R9 675 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 BEND7Q8N7W2 519 aaPredicted RBP10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 NOA1Q8NC60 698 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 GALNT6Q8NCL4 622 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 ZNF669Q96BR6 464 aaPredicted RBP10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 MFSD3Q96ES6 412 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 OR6C1Q96RD1 312 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms