RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 EIF3BP55884 814 aaKnown RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 STX17P56962 302 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 NOP14P78316 857 aaKnown RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 DPTQ07507 201 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 ABRQ12979 859 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 TRAF1Q13077 416 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 DNAJC3Q13217 504 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 PDCLQ13371 301 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 CYP1B1Q16678 543 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 HSP90AA4PQ58FG1 418 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 CFAP157Q5JU67 520 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 ZNF658Q5TYW1 1059 aaPredicted RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 RAP1GAP2Q684P5 730 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 NEK5Q6P3R8 708 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 CYB5D1Q6P9G0 228 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 CROCCP2Q86T23 111 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 TICAM1Q8IUC6 712 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 DNAJC10Q8IXB1 793 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 KLHL7Q8IXQ5 586 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 TTC5Q8N0Z6 440 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 RBM15BQ8NDT2 890 aaKnown RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 ST7LQ8TDW4 575 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 WDR60Q8WVS4 1066 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 NELFBQ8WX92 580 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 C14orf79Q96F83 325 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 PGAM5Q96HS1 289 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 CAPZA3Q96KX2 299 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 PRICKLE1Q96MT3 831 aaPredicted RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 GDAP1L1Q96MZ0 367 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 DGAT2Q96PD7 388 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 ZIM3Q96PE6 472 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 ZBTB18Q99592 522 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 CHP1Q99653 195 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 CCT7Q99832 543 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 SSX3Q99909 188 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 PIMREGQ9BSJ6 248 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 MTG1Q9BT17 334 aaPredicted RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 HTATIP2Q9BUP3 242 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 NUP85Q9BW27 656 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 CRNKL1Q9BZJ0 848 aaKnown RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 CNOT10Q9H9A5 744 aaKnown RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 TMBIM4Q9HC24 238 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 SYTL2Q9HCH5 934 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 FBRSL1Q9HCM7 1045 aaKnown RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 SPATS2LQ9NUQ6 558 aaKnown RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 CNIH4Q9P003 139 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 C11orf21Q9P2W6 132 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 SPASTQ9UBP0 616 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 TDRKHQ9Y2W6 561 aaKnown RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 COPG1Q9Y678 874 aaKnown RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 U3KQV3 271 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 LTN1O94822 1766 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 DISP2A7MBM2 1401 aa4.72□□□□□ -1.65
RTN4-215ENST00000491592 PDS5AQ29RF7 1337 aaKnown RBP4.72□□□□□ -1.65
RTN4-215ENST00000491592 ARHGAP23Q9P227 1491 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 LOC100509620A0A075B734 347 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 HTR3EA5X5Y0 456 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 GAGE10A6NGK3 116 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 ENO4A6NNW6 628 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 BTBD18B2RXH4 712 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 MEIS2O14770 477 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 GPAA1O43292 621 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 TNFSF14O43557 240 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 TRAPPC3O43617 180 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 SULT1B1O43704 296 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 TADA2AO75478 443 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 CRTAPO75718 401 aaPredicted RBP4.71□□□□□ -1.66
RTN4-215ENST00000491592 RHOBTB1O94844 696 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 TJP3O95049 919 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 LUC7L3O95232 432 aaKnown RBP4.71□□□□□ -1.66
RTN4-215ENST00000491592 AK1P00568 194 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 MT-ATP6P00846 226 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 KRT8P05787 483 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 GALTP07902 379 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 MYZAPP0CAP1 466 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 TROVE2P10155 538 aaKnown RBP eCLIP4.71□□□□□ -1.66
RTN4-215ENST00000491592 THRBP10828 461 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 NDUFB7P17568 137 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 ENGP17813 658 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 DRD4P21917 467 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 AHCYP23526 432 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 PTBP1P26599 531 aaKnown RBP eCLIP4.71□□□□□ -1.66
RTN4-215ENST00000491592 HTR7P34969 479 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 CA8P35219 290 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 SLC15A1P46059 708 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 OR1G1P47890 313 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 FASLGP48023 281 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 GATMP50440 423 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 CCT8P50990 548 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 PLTPP55058 493 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 ATP5IP56385 69 aaPredicted RBP4.71□□□□□ -1.66
RTN4-215ENST00000491592 RWDD2BP57060 319 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 TNNC1P63316 161 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 E2F1Q01094 437 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 PMP22Q01453 160 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 SPIBQ01892 262 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 C2orf54Q08AI8 447 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 HSPA14Q0VDF9 509 aa4.71□□□□□ -1.66
RTN4-215ENST00000491592 ITGB3BPQ13352 177 aaPredicted RBP4.71□□□□□ -1.66
RTN4-215ENST00000491592 RAPSNQ13702 412 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms