RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 OR4L1Q8NH43 312 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 SGSM3Q96HU1 749 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 PITPNM3Q9BZ71 974 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 CHRAC1Q9NRG0 131 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 ICKQ9UPZ9 632 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 BSNQ9UPA5 3926 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 TLN1Q9Y490 2541 aaKnown RBP17.45■□□□□ 0.38
HMGN1-219ENST00000491183 CREG1O75629 220 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 SCRG1O75711 98 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 FGGP02679 453 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 OR56A5P0C7T3 313 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 PVRP15151 417 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 GPS2Q13227 327 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 LDB1Q86U70 411 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-219ENST00000491183 PTRH1Q86Y79 214 aaKnown RBP17.45■□□□□ 0.38
HMGN1-219ENST00000491183 TMEM126BQ8IUX1 230 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 OR8K5Q8NH50 307 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 PEX13Q92968 403 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.45■□□□□ 0.38
HMGN1-219ENST00000491183 TRAPPC9Q96Q05 1148 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 LATS2Q9NRM7 1088 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 ACTR10Q9NZ32 417 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 MARCH4Q9P2E8 410 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-219ENST00000491183 ASF1AQ9Y294 204 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 KCNMB2Q9Y691 235 aa17.45■□□□□ 0.38
HMGN1-219ENST00000491183 C2orf74A8MZ97 194 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 C21orf140B9A014 251 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 RECKO95980 971 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 CCR7P32248 378 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 CXCR5P32302 372 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 SESN2P58004 480 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-219ENST00000491183 PRAMEP78395 509 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 CRADDP78560 199 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 ABRQ12979 859 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 FASTKD1Q53R41 847 aaKnown RBP17.44■□□□□ 0.38
HMGN1-219ENST00000491183 ZNF789Q5FWF6 425 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 PCID2Q5JVF3 399 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 ZNF517Q6ZMY9 492 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-219ENST00000491183 UNC5AQ6ZN44 842 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 NLRP9Q7RTR0 991 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 TBC1D21Q8IYX1 336 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 OR1L3Q8NH93 324 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 LKAAEAR1Q8TD35 194 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 ABHD17AQ96GS6 310 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 TTC1Q99614 292 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 TWSG1Q9GZX9 223 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 KLHL25Q9H0H3 589 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 ZNF71Q9NQZ8 489 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-219ENST00000491183 EIF2B3Q9NR50 452 aaKnown RBP17.44■□□□□ 0.38
HMGN1-219ENST00000491183 CDYLQ9Y232 598 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 ZKSCAN5Q9Y2L8 839 aa17.44■□□□□ 0.38
HMGN1-219ENST00000491183 PIPSLA2A3N6 862 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 CDC14CA4D256 554 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 IQCF5A8MTL0 148 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 CEP104O60308 925 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 CPNE3O75131 537 aaKnown RBP17.43■□□□□ 0.38
HMGN1-219ENST00000491183 MSL3P1P0C860 447 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 CSE1LP55060 971 aaKnown RBP17.43■□□□□ 0.38
HMGN1-219ENST00000491183 RPS18P62269 152 aaKnown RBP17.43■□□□□ 0.38
HMGN1-219ENST00000491183 PLEKHS1Q5SXH7 462 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 LCN10Q6JVE6 187 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 C4orf22Q6V702 233 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 ATG14Q6ZNE5 492 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 VRK3Q8IV63 474 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 PPHLN1Q8NEY8 458 aaKnown RBP17.43■□□□□ 0.38
HMGN1-219ENST00000491183 TRIM58Q8NG06 486 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 FLVCR1-AS1Q8TAF5 88 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 MAIP1Q8WWC4 291 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 TRIM4Q9C037 500 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 ACTL8Q9H568 366 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 SYTL2Q9HCH5 934 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 TREX1Q9NSU2 369 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 SPHK1Q9NYA1 384 aa17.43■□□□□ 0.38
HMGN1-219ENST00000491183 TDRKHQ9Y2W6 561 aaKnown RBP17.43■□□□□ 0.38
HMGN1-219ENST00000491183 GPC4O75487 556 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 WISP1O95388 367 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 NMBRP28336 390 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 PTPN4P29074 926 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 SHMT2P34897 504 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 NPY2RP49146 381 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 BASP1P80723 227 aaKnown RBP17.42■□□□□ 0.38
HMGN1-219ENST00000491183 PLOD1Q02809 727 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-219ENST00000491183 SPESP1Q6UW49 350 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 CDHR3Q6ZTQ4 885 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 GSTA5Q7RTV2 222 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 TRIM73Q86UV7 250 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 PRELID2Q8N945 189 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 OR5K2Q8NHB8 316 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 C9orf43Q8TAL5 461 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-219ENST00000491183 MR1Q95460 341 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 LRFN5Q96NI6 719 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 OR2A14Q96R47 310 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 CARD6Q9BX69 1037 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 AP1M1Q9BXS5 423 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 GPR87Q9BY21 358 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 CHST8Q9H2A9 424 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 FAM60AQ9NP50 221 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 CATSPERZQ9NTU4 200 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 POLG2Q9UHN1 485 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 PLAGL1Q9UM63 463 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms