RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 C2orf74A8MZ97 194 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 ZNF487B1APH4 448 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 PPP1R12AO14974 1030 aaPredicted RBP13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 ALOX12BO75342 701 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 PRAMEF1O95521 474 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 CTSBP07858 339 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 FAM228BP0C875 321 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 PTPN3P26045 913 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 CD68P34810 354 aaPredicted RBP13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 PTGER4P35408 488 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 GABRA4P48169 554 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 WNT3AP56704 352 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 DEFB110Q30KQ9 67 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 AGAP7PQ5VUJ5 663 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 PRAMEF13Q5VWM6 474 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 SPESP1Q6UW49 350 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 ADGRF3Q8IZF5 1079 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 SLC25A41Q8N5S1 370 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 C19orf47Q8N9M1 422 aaKnown RBP13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 OR52E1Q8NGJ3 308 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 HM13Q8TCT9 377 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 ITLN2Q8WWU7 325 aaPredicted RBP13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 N4BP2L2Q92802 583 aaPredicted RBP13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 RBM41Q96IZ5 413 aaKnown RBP13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 CNDP1Q96KN2 507 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 TEKT5Q96M29 485 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 AGAP4Q96P64 663 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 FERD3LQ96RJ6 166 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 TFB2MQ9H5Q4 396 aaKnown RBP13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 SLC6A20Q9NP91 592 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 ACTR10Q9NZ32 417 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 CHMP5Q9NZZ3 219 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 FBXL4Q9UKA2 621 aa13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 BZW2Q9Y6E2 419 aaKnown RBP13.17□□□□□ -0.3
CTDSP1-210ENST00000491064 CCDC78A2IDD5 438 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 LRRD1A4D1F6 860 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 C3orf70A6NLC5 250 aaPredicted RBP13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 APOL1O14791 398 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 EPOP01588 193 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 OTUD4Q01804 1114 aaKnown RBP13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 PTPRCAPQ14761 206 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 TLR1Q15399 786 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 ZIC1Q15915 447 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 NKAIN1Q4KMZ8 207 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 FCRL6Q6DN72 434 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 ALKBH5Q6P6C2 394 aaKnown RBP13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 FAM180AQ6UWF9 173 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 TRIM73Q86UV7 250 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 AMIGO1Q86WK6 493 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 NACC2Q96BF6 587 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 MRGPRX2Q96LB1 330 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 OR52A5Q9H2C5 316 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 XKR8Q9H6D3 395 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 SLC22A11Q9NSA0 550 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 TXLNGQ9NUQ3 528 aa13.16□□□□□ -0.3
CTDSP1-210ENST00000491064 STX7O15400 261 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 ZSCAN9O15535 394 aaPredicted RBP13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 JRKO75564 520 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 NFKB1P19838 968 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 MMP11P24347 488 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 PRLHRP49683 370 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 SLC1A5Q15758 541 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 SARM1Q6SZW1 724 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 VSIG1Q86XK7 387 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 PARP9Q8IXQ6 854 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 NXPE1Q8N323 547 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 ZNF655Q8N720 491 aaPredicted RBP13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 BCORP1Q8N888 145 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 PHC3Q8NDX5 983 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.15□□□□□ -0.33e-8■■■■■ 70.6
CTDSP1-210ENST00000491064 CHRNA10Q9GZZ6 450 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 EPS8L2Q9H6S3 715 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 ASB8Q9H765 288 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 MVB12BQ9H7P6 319 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 OLAHQ9NV23 265 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 CTTNBP2NLQ9P2B4 639 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 ITGB1BP2Q9UKP3 347 aa13.15□□□□□ -0.3
CTDSP1-210ENST00000491064 A0A1B0GTH6 734 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 C17orf113A0A1B0GUU1 675 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 IFRD1O00458 451 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 SOCS6O14544 535 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 SNRPB2P08579 225 aaKnown RBP13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 UGT2B7P16662 529 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 CD151P48509 253 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 TDGF1P3P51864 188 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 KCNK10P57789 538 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 WASHC5Q12768 1159 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 PRKG2Q13237 762 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 PRKD1Q15139 912 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 NFKBIBQ15653 356 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 KRTAP21-3Q3LHN1 58 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 FILIP1LQ4L180 1135 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 ZNF658BQ4V348 819 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 FIGNQ5HY92 759 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 IRAK1BP1Q5VVH5 260 aa13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 ZNF324BQ6AW86 544 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 RPUSD3Q6P087 351 aaKnown RBP13.14□□□□□ -0.31
CTDSP1-210ENST00000491064 TLDC1Q6P9B6 456 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms