RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 C4orf22Q6V702 233 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 SNX20Q7Z614 316 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 TMEM126BQ8IUX1 230 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 ACVR1CQ8NER5 493 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 NAT14Q8WUY8 206 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 CPT1BQ92523 772 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 ELMO2Q96JJ3 720 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 DNAJC1Q96KC8 554 aaKnown RBP10.09□□□□□ -0.79
TTC28-207ENST00000490475 COPS8Q99627 209 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 MAP3K3Q99759 626 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 C17orf62Q9BQA9 187 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 DDX47Q9H0S4 455 aaKnown RBP10.09□□□□□ -0.79
TTC28-207ENST00000490475 L2HGDHQ9H9P8 463 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 CASS4Q9NQ75 786 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 ZNF71Q9NQZ8 489 aaPredicted RBP10.09□□□□□ -0.79
TTC28-207ENST00000490475 SLC24A2Q9UI40 661 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 PSMD13Q9UNM6 376 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 BTRCQ9Y297 605 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 NEU2Q9Y3R4 380 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 PCDHGB7Q9Y5F8 929 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 FLNCQ14315 2725 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 GOLGA6L10A0A0M3HER8 536 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 CDC14CA4D256 554 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 PYCARD-AS1I3L0S3 204 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 KLHL41O60662 606 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 SCRG1O75711 98 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 NTRK1P04629 796 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 CD63P08962 238 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 HBQ1P09105 142 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 RAB40ALP0C0E4 278 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 PRSS56P0CW18 603 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 ATP1B2P14415 290 aaPredicted RBP10.08□□□□□ -0.8
TTC28-207ENST00000490475 FOLR1P15328 257 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 F8A1P23610 371 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 PBLDP30039 288 aaPredicted RBP10.08□□□□□ -0.8
TTC28-207ENST00000490475 CDKN1CP49918 316 aaPredicted RBP10.08□□□□□ -0.8
TTC28-207ENST00000490475 SESN2P58004 480 aaPredicted RBP10.08□□□□□ -0.8
TTC28-207ENST00000490475 ETF1P62495 437 aaKnown RBP10.08□□□□□ -0.8
TTC28-207ENST00000490475 PLOD1Q02809 727 aaPredicted RBP10.08□□□□□ -0.8
TTC28-207ENST00000490475 LAMB3Q13751 1172 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 UGT8Q16880 541 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 SKIDA1Q1XH10 827 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 ANKRD22Q5VYY1 191 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 IZUMO3Q5VZ72 239 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 PWWP2BQ6NUJ5 590 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 SYT10Q6XYQ8 523 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 ASB18Q6ZVZ8 466 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 NXPE1Q8N323 547 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 GPR150Q8NGU9 434 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 CT55Q8WUE5 264 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 CDKN2AIPNLQ96HQ2 116 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 ZNF778Q96MU6 729 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 INSM2Q96T92 566 aaPredicted RBP10.08□□□□□ -0.8
TTC28-207ENST00000490475 DPH2Q9BQC3 489 aaPredicted RBP10.08□□□□□ -0.8
TTC28-207ENST00000490475 WWP1Q9H0M0 922 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 SRMSQ9H3Y6 488 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 ACTL8Q9H568 366 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 MVB12BQ9H7P6 319 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 CHRAC1Q9NRG0 131 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 NLE1Q9NVX2 485 aaPredicted RBP10.08□□□□□ -0.8
TTC28-207ENST00000490475 SOHLH2Q9NX45 425 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 SLC2A6Q9UGQ3 507 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 SERTAD3Q9UJW9 196 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 FARSAQ9Y285 508 aaKnown RBP10.08□□□□□ -0.8
TTC28-207ENST00000490475 TP53TG5Q9Y2B4 290 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 PCDHGA9Q9Y5G4 932 aaKnown RBP10.08□□□□□ -0.8
TTC28-207ENST00000490475 MRPS18BQ9Y676 258 aaKnown RBP10.08□□□□□ -0.8
TTC28-207ENST00000490475 PIKFYVEQ9Y2I7 2098 aa10.08□□□□□ -0.8
TTC28-207ENST00000490475 OR6C74A6NCV1 312 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 H7C0S8 307 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 AVILO75366 819 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 AP2A2O94973 939 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 GAS8O95995 478 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 EBLN1P0CF75 366 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 CDH3P22223 829 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 ADRA1DP25100 572 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 CASQ1P31415 396 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 MC4RP32245 332 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 FNTAP49354 379 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 CRADDP78560 199 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 UBAP2LQ14157 1087 aaKnown RBP10.07□□□□□ -0.8
TTC28-207ENST00000490475 KCNJ11Q14654 390 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 CAPRIN2Q6IMN6 1127 aaKnown RBP10.07□□□□□ -0.8
TTC28-207ENST00000490475 ZNF517Q6ZMY9 492 aaPredicted RBP10.07□□□□□ -0.8
TTC28-207ENST00000490475 FAM83HQ6ZRV2 1179 aaPredicted RBP10.07□□□□□ -0.8
TTC28-207ENST00000490475 DET1Q7L5Y6 550 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 HOOK3Q86VS8 718 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 KLHL7Q8IXQ5 586 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 CFAP206Q8IYR0 622 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 STYXQ8WUJ0 223 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 LCN9Q8WX39 176 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.07□□□□□ -0.8
TTC28-207ENST00000490475 C16orf45Q96MC5 204 aaPredicted RBP10.07□□□□□ -0.8
TTC28-207ENST00000490475 IP6K3Q96PC2 410 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 TTC1Q99614 292 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 SLC7A5P2Q9GIP4 190 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 ACSS2Q9NR19 701 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 EIF2B3Q9NR50 452 aaKnown RBP10.07□□□□□ -0.8
TTC28-207ENST00000490475 ZDHHC3Q9NYG2 299 aa10.07□□□□□ -0.8
TTC28-207ENST00000490475 POMT2Q9UKY4 750 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms