RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 THAP3Q8WTV1 239 aaPredicted RBP6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 FAM172AQ8WUF8 416 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 PSMF1Q92530 271 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 HAS2Q92819 552 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 THOC3Q96J01 351 aaKnown RBP6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 MAGED4Q96JG8 741 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 COX4I2Q96KJ9 171 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 MGME1Q9BQP7 344 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 MESP1Q9BRJ9 268 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 SP110Q9HB58 689 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 PLA2G3Q9NZ20 509 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 POMT2Q9UKY4 750 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 NBEAL2Q6ZNJ1 2754 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 CHD3Q12873 2000 aaKnown RBP6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 PRKDCP78527 4128 aaKnown RBP6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 SNRNP200O75643 2136 aaKnown RBP6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 FAM237AA0A1B0GTK4 181 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 C17orf113A0A1B0GUU1 675 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 RNF212BA8MTL3 300 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 FAM171A2A8MVW0 826 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 INAFM1C9JVW0 142 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 E7EQ34 232 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 E9PLN8 166 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 KMOO15229 486 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 ZNHIT1O43257 154 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 TOXO94900 526 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 ZRANB2O95218 330 aaKnown RBP eCLIP6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 RASAL1O95294 804 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 CLDN7O95471 211 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 CD63P08962 238 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 CYP11B1P15538 503 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 ST6GAL1P15907 406 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 IDSP22304 550 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 CMA1P23946 247 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 RFC1P35251 1148 aaPredicted RBP6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 SPAM1P38567 509 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 PREPP48147 710 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 SPINT3P49223 89 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 LMAN1P49257 510 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 CTSCP53634 463 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 CACNG1Q06432 222 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 DMPKQ09013 629 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 RPE65Q16518 533 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 PCSK7Q16549 785 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 CCDC40Q4G0X9 1142 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 KHDC1Q4VXA5 237 aaKnown RBP6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 C1orf189Q5VU69 101 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 LRRTM4Q86VH4 590 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 OOSP2Q86WS3 158 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 FAM20CQ8IXL6 584 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 ANKRD20A12PQ8NF67 263 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 OR11G2Q8NGC1 345 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 PROKR1Q8TCW9 393 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 GPR137Q96N19 417 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 ZNF599Q96NL3 588 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 VKORC1Q9BQB6 163 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 CRACR2AQ9BSW2 395 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 PITPNM3Q9BZ71 974 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 TRIM39Q9HCM9 518 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 IFT80Q9P2H3 777 aaPredicted RBP6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 APEX2Q9UBZ4 518 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 TRIM10Q9UDY6 481 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 NDOR1Q9UHB4 597 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 SERTAD3Q9UJW9 196 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 RCOR1Q9UKL0 485 aa6.85□□□□□ -1.31
PDLIM1-203ENST00000490391 TRRAPQ9Y4A5 3859 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 DYTNA2CJ06 578 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 NKX2-6A6NCS4 301 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 OR6C74A6NCV1 312 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 FOXN3O00409 490 aaPredicted RBP6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 HCRTR1O43613 425 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 PMPCBO75439 489 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 F10P00742 488 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 CTSBP07858 339 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 SLC9A1P19634 815 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 ITGAXP20702 1163 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 HSPA9P38646 679 aaKnown RBP6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 SYKP43405 635 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 GABRA4P48169 554 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 NDUFA8P51970 172 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 DGKQP52824 942 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 MAXP61244 160 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 NOMO3P69849 1222 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 DCDP81605 110 aaKnown RBP6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 PLAURQ03405 335 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 MYBPHQ13203 477 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 GALNT3Q14435 633 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 TUBB8Q3ZCM7 444 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 NKAIN1Q4KMZ8 207 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 RALGPS1Q5JS13 557 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 C3P1Q6ZMU1 363 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 CDHR3Q6ZTQ4 885 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 CAMKMTQ7Z624 323 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 DOLPP1Q86YN1 238 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 FAM71AQ8IYT1 594 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 MARVELD2Q8N4S9 558 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 C3orf20Q8ND61 904 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 RMND5BQ96G75 393 aaPredicted RBP6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 FAM81BQ96LP2 452 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 LYSMD1Q96S90 227 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms