RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 C1orf141Q5JVX7 400 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 CHST3Q7LGC8 479 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 CENPVQ7Z7K6 275 aaPredicted RBP3.67□□□□□ -1.82
CD46-216ENST00000490278 NR2C2APQ86WQ0 139 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 LMNTD1Q8N9Z9 388 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 OR2T12Q8NG77 320 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 ALG14Q96F25 216 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 SFXN2Q96NB2 322 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 VN1R1Q9GZP7 353 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 MMP28Q9H239 520 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 ZHX1Q9UKY1 873 aaPredicted RBP3.67□□□□□ -1.82
CD46-216ENST00000490278 RPS6KL1Q9Y6S9 549 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 A0A1W2PPM1 405 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 H7C0S8 307 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 LMX1BO60663 402 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 IGLV2-11P01706 119 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 NR3C1P04150 777 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 CCDC175P0C221 793 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 FGF5P12034 268 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 PAX1P15863 534 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 EPHA2P29317 976 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 VWC2Q2TAL6 325 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 C19orf48Q6RUI8 117 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 ANO5Q75V66 913 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 CCDC186Q7Z3E2 898 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 PLD3Q8IV08 490 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 VPS33AQ96AX1 596 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 STAMBPL1Q96FJ0 436 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 ZNF354BQ96LW1 612 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 INPP4AQ96PE3 977 aaPredicted RBP3.66□□□□□ -1.82
CD46-216ENST00000490278 MYADMQ96S97 322 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 RTP3Q9BQQ7 232 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 ANKRD2Q9GZV1 360 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 ARRDC1-AS1Q9H2J1 176 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 ERVMER34-1Q9H9K5 563 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 PELI2Q9HAT8 420 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 ZNF334Q9HCZ1 680 aaPredicted RBP3.66□□□□□ -1.82
CD46-216ENST00000490278 B3GAT1Q9P2W7 334 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 GIMAP2Q9UG22 337 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 TUBE1Q9UJT0 475 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 SLC7A7Q9UM01 511 aa3.66□□□□□ -1.82
CD46-216ENST00000490278 SOS1Q07889 1333 aaPredicted RBP3.66□□□□□ -1.82
CD46-216ENST00000490278 SCN5AQ14524 2016 aa3.65□□□□□ -1.82
CD46-216ENST00000490278 OR6C76A6NM76 312 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 IFITM10A6NMD0 228 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 E9PI62 339 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 TRIM77I1YAP6 450 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 GAPDHSO14556 408 aaPredicted RBP3.65□□□□□ -1.83
CD46-216ENST00000490278 DIAPH2O60879 1101 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 ZNF432O94892 652 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 SLCO2B1O94956 709 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 WDPCPO95876 746 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 FYNP06241 537 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 RAB40ALP0C0E4 278 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 GNAZP19086 355 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 CX3CL1P78423 397 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 PRKCZQ05513 592 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 CAMK2DQ13557 499 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 COG2Q14746 738 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 PSMD6Q15008 389 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 KLHL22Q53GT1 634 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 TECRLQ5HYJ1 363 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 STPG1Q5TH74 334 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 KRT39Q6A163 491 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 CORO6Q6QEF8 472 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 DET1Q7L5Y6 550 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 SLC26A9Q7LBE3 791 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 TRMT1LQ7Z2T5 733 aaKnown RBP3.65□□□□□ -1.83
CD46-216ENST00000490278 ZNF554Q86TJ5 538 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 CFAP206Q8IYR0 622 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 MAML2Q8IZL2 1156 aaPredicted RBP3.65□□□□□ -1.83
CD46-216ENST00000490278 ARHGAP24Q8N264 748 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 PI4KAP1Q8N8J0 262 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 TRIML1Q8N9V2 468 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 KLHDC9Q8NEP7 349 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 MRPS27Q92552 414 aaKnown RBP3.65□□□□□ -1.83
CD46-216ENST00000490278 SLC47A1Q96FL8 570 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 UHRF2Q96PU4 802 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 TRAF4Q9BUZ4 470 aaPredicted RBP3.65□□□□□ -1.83
CD46-216ENST00000490278 NUP85Q9BW27 656 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 ACAD8Q9UKU7 415 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 ABT1Q9ULW3 272 aaKnown RBP3.65□□□□□ -1.83
CD46-216ENST00000490278 PADI2Q9Y2J8 665 aa3.65□□□□□ -1.83
CD46-216ENST00000490278 A0A1W2PPQ1 181 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 PTGESO14684 152 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 RNASEH1O60930 286 aaKnown RBP3.64□□□□□ -1.83
CD46-216ENST00000490278 CELF2O95319 508 aaKnown RBP3.64□□□□□ -1.83
CD46-216ENST00000490278 C22orf31O95567 290 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 ERCC2P18074 760 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 ACHEP22303 614 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 DCTP40126 519 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 ZNF41P51814 821 aaPredicted RBP3.64□□□□□ -1.83
CD46-216ENST00000490278 PDX1P52945 283 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 PHEXP78562 749 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 TNIP1Q15025 636 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 WDR38Q5JTN6 314 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 KRBOX4Q5JUW0 171 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 PLA2G4FQ68DD2 849 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 PRR27Q6MZM9 219 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 SLC27A1Q6PCB7 646 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms