RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 GPR135Q8IZ08 494 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 HM13Q8TCT9 377 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 PROKR1Q8TCW9 393 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 RAPGEF5Q92565 580 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 PTERQ96BW5 349 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 GBP5Q96PP8 586 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 BPIFA3Q9BQP9 254 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 UNKQ9C0B0 810 aaKnown RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 SLC7A5P2Q9GIP4 190 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 SRMSQ9H3Y6 488 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 TFB2MQ9H5Q4 396 aaKnown RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 RUBCNLQ9H714 662 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 ZBTB20Q9HC78 741 aaPredicted RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 ATP13A2Q9NQ11 1180 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 FAM153AQ9UHL3 310 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 NOVA2Q9UNW9 492 aaKnown RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 PTRH2Q9Y3E5 179 aaKnown RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 PKP3Q9Y446 797 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 AP1M2Q9Y6Q5 423 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 NF1P21359 2839 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 SVILO95425 2214 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 SETD2Q9BYW2 2564 aaPredicted RBP7.92□□□□□ -1.14
USP39-216ENST00000490193 A0A1B0GUH1 482 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 ARHGAP10A1A4S6 786 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 GSAPA4D1B5 854 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 C2orf74A8MZ97 194 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 AGPSO00116 658 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 BTN3A3O00478 584 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 BTN3A1O00481 513 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 APOL1O14791 398 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 LDB2O43679 373 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 ZG16O60844 167 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 CNOT3O75175 753 aaKnown RBP7.92□□□□□ -1.14
USP39-216ENST00000490193 SNRNP200O75643 2136 aaKnown RBP7.92□□□□□ -1.14
USP39-216ENST00000490193 PRAMEF1O95521 474 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 UMODP07911 640 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 CBSLP0DN79 551 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 ZFXP17010 805 aaPredicted RBP7.92□□□□□ -1.14
USP39-216ENST00000490193 PTPN3P26045 913 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 AKT1P31749 480 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 CD68P34810 354 aaPredicted RBP7.92□□□□□ -1.14
USP39-216ENST00000490193 CBSP35520 551 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 CHRNA4P43681 627 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 PRLHRP49683 370 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 WNT3AP56704 352 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 DCDP81605 110 aaKnown RBP7.92□□□□□ -1.14
USP39-216ENST00000490193 AIMP2Q13155 320 aaKnown RBP7.92□□□□□ -1.14
USP39-216ENST00000490193 PRKD1Q15139 912 aaPredicted RBP7.92□□□□□ -1.14
USP39-216ENST00000490193 NOMO1Q15155 1222 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 SLC1A5Q15758 541 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 ANO6Q4KMQ2 910 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 ZNF658BQ4V348 819 aaPredicted RBP7.92□□□□□ -1.14
USP39-216ENST00000490193 MLIPQ5VWP3 458 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 FCRL6Q6DN72 434 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 MCEMP1Q8IX19 187 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 ADGRF3Q8IZF5 1079 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 ZNF398Q8TD17 642 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 GRHL3Q8TE85 626 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 FAR1Q8WVX9 515 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 LCN9Q8WX39 176 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 MRGPRX2Q96LB1 330 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 C19orf43Q9BQ61 176 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 SLX1AQ9BQ83 275 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 AP1M1Q9BXS5 423 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 UBP1Q9NZI7 540 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 GPN3Q9UHW5 284 aaPredicted RBP7.92□□□□□ -1.14
USP39-216ENST00000490193 OSGIN2Q9Y236 505 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 CSAG2Q9Y5P2 127 aa7.92□□□□□ -1.14
USP39-216ENST00000490193 ZFHX3Q15911 3703 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 CNTRLQ7Z7A1 2325 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 CCDC66A2RUB6 948 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 LRRD1A4D1F6 860 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 PRSS44E7EML9 344 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 OR2B3O76000 313 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 PVRP15151 417 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 NFKB1P19838 968 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 MMP11P24347 488 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 PTGER4P35408 488 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 GCGRP47871 477 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 CD151P48509 253 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 WASHC5Q12768 1159 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 ART3Q13508 389 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 KRT33BQ14525 404 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 NR1I3Q14994 352 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 CYP2A13Q16696 494 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 KRTAP21-3Q3LHN1 58 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 NKAIN1Q4KMZ8 207 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 PRAMEF13Q5VWM6 474 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 RPUSD3Q6P087 351 aaKnown RBP7.91□□□□□ -1.14
USP39-216ENST00000490193 SARM1Q6SZW1 724 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 SPESP1Q6UW49 350 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 NPNTQ6UXI9 565 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 DET1Q7L5Y6 550 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 DAAM2Q86T65 1068 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 AMIGO1Q86WK6 493 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 CFAP206Q8IYR0 622 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 LILRA3Q8N6C8 439 aaPredicted RBP7.91□□□□□ -1.14
USP39-216ENST00000490193 C19orf47Q8N9M1 422 aaKnown RBP7.91□□□□□ -1.14
USP39-216ENST00000490193 OR52E1Q8NGJ3 308 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 BLOC1S5Q8TDH9 187 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms