RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 ABCG8Q9H221 673 aa15.75■□□□□ 0.11
SNX5-214ENST00000490175 CMTM6Q9NX76 183 aa15.75■□□□□ 0.11
SNX5-214ENST00000490175 MKI67P46013 3256 aaKnown RBP15.74■□□□□ 0.11
SNX5-214ENST00000490175 GFYI3L273 518 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 ARNTLO00327 626 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 RNASEH2AO75792 299 aaKnown RBP15.74■□□□□ 0.11
SNX5-214ENST00000490175 CLDN9O95484 217 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 AP1S2P56377 157 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 ST8SIA6P61647 398 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 Q6ZVL8 140 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 ITFG1Q8TB96 612 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 SCAMP4Q969E2 229 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 TMEM125Q96AQ2 219 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 VPS35Q96QK1 796 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 UHRF1Q96T88 793 aaPredicted RBP15.74■□□□□ 0.11
SNX5-214ENST00000490175 FAM83CQ9BQN1 747 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 Q9H521 79 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 ASIC5Q9NY37 505 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 ACTR3BQ9P1U1 418 aa15.74■□□□□ 0.11
SNX5-214ENST00000490175 EIF3LQ9Y262 564 aaKnown RBP15.74■□□□□ 0.11
SNX5-214ENST00000490175 C16orf96A6NNT2 1141 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 LOC730098B7Z3J9 87 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 MANBAO00462 879 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 PER2O15055 1255 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 ANKRD28O15084 1053 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 KRT6AP02538 564 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 KRT6BP04259 564 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 G6PDP11413 515 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 CYP2A7P20853 494 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 IL12AP29459 219 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 KRT6CP48668 564 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 HSPA13P48723 471 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 EEFSECP57772 596 aaKnown RBP15.73■□□□□ 0.11
SNX5-214ENST00000490175 CAPRIN1Q14444 709 aaKnown RBP15.73■□□□□ 0.11
SNX5-214ENST00000490175 ZNF284Q2VY69 593 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 GGTA1PQ4G0N0 100 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 LDLRAP1Q5SW96 308 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 LCN8Q6JVE9 175 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 ERAP2Q6P179 960 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 DET1Q7L5Y6 550 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 SPRED2Q7Z698 418 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 TECPR1Q7Z6L1 1165 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 NRSN1Q8IZ57 195 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 ASZ1Q8WWH4 475 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 SMG7Q92540 1137 aaKnown RBP15.73■□□□□ 0.11
SNX5-214ENST00000490175 USP7Q93009 1102 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 SAMD11Q96NU1 681 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 LRRC3BQ96PB8 259 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 ARMC1Q9NVT9 282 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 PSMD11O00231 422 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 DNAJA2O60884 412 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 PAPLNO95428 1278 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 PIM1P11309 404 aaPredicted RBP15.73■□□□□ 0.11
SNX5-214ENST00000490175 PCSK2P16519 638 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 MMP12P39900 470 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 ETV3P41162 512 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 DYNC1I2Q13409 638 aaKnown RBP15.73■□□□□ 0.11
SNX5-214ENST00000490175 BOP1Q14137 746 aaKnown RBP15.73■□□□□ 0.11
SNX5-214ENST00000490175 TIGD2Q4W5G0 525 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 RFTN2Q52LD8 501 aaPredicted RBP15.73■□□□□ 0.11
SNX5-214ENST00000490175 PAGE3Q5JUK9 113 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 CYP2R1Q6VVX0 501 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 MBOAT1Q6ZNC8 495 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 MCOLN3Q8TDD5 553 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 BTN2A2Q8WVV5 523 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 MAGEB10Q96LZ2 347 aaPredicted RBP15.73■□□□□ 0.11
SNX5-214ENST00000490175 RIOK2Q9BVS4 552 aaKnown RBP15.73■□□□□ 0.11
SNX5-214ENST00000490175 KLQ9UEF7 1012 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 ZNF490Q9ULM2 529 aaPredicted RBP15.73■□□□□ 0.11
SNX5-214ENST00000490175 RAB26Q9ULW5 256 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 RNF11Q9Y3C5 154 aa15.73■□□□□ 0.11
SNX5-214ENST00000490175 POLR3HQ9Y535 204 aaPredicted RBP15.73■□□□□ 0.11
SNX5-214ENST00000490175 H0YJX3 145 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 DENRO43583 198 aaKnown RBP15.72■□□□□ 0.11
SNX5-214ENST00000490175 RNASEH1O60930 286 aaKnown RBP15.72■□□□□ 0.11
SNX5-214ENST00000490175 SLC2A4P14672 509 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 GNPDA1P46926 289 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 SLC6A12P48065 614 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 FOLH1Q04609 750 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 INPP5AQ14642 412 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 PTRH1Q86Y79 214 aaKnown RBP15.72■□□□□ 0.11
SNX5-214ENST00000490175 RASGRP3Q8IV61 690 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 SKA2Q8WVK7 121 aaPredicted RBP15.72■□□□□ 0.11
SNX5-214ENST00000490175 SLCO4A1Q96BD0 722 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 HBEGFQ99075 208 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 ZBTB18Q99592 522 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 ACTL8Q9H568 366 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 ACTR8Q9H981 624 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 MBD1Q9UIS9 605 aaPredicted RBP15.72■□□□□ 0.11
SNX5-214ENST00000490175 FFAR3O14843 346 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 GPR42O15529 346 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 SGTAO43765 313 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 TULP3O75386 442 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 SLCO2B1O94956 709 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 NFATC1O95644 943 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 PRNPP04156 253 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 ATP6V1B2P21281 511 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 GRIA3P42263 894 aa15.72■□□□□ 0.11
SNX5-214ENST00000490175 RPL38P63173 70 aaKnown RBP15.72■□□□□ 0.11
SNX5-214ENST00000490175 IMPG1Q17R60 797 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms