RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 ABCG4Q9H172 646 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 OGFRQ9NZT2 677 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.98■□□□□ 0.31
ERCC3-207ENST00000490062 ZNF180Q9UJW8 692 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 MN1Q10571 1320 aaPredicted RBP16.97■□□□□ 0.31
ERCC3-207ENST00000490062 GFYI3L273 518 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 KDM1AO60341 852 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 UBXN7O94888 489 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 MT-CO3P00414 261 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 ZNF37AP17032 561 aaPredicted RBP16.97■□□□□ 0.31
ERCC3-207ENST00000490062 ALDH4A1P30038 563 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 CCKBRP32239 447 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 ABCG1P45844 678 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 CAPZBP47756 277 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 RGS4P49798 205 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 PDX1P52945 283 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 TAS2R39P59534 338 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 SHC2P98077 582 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 CFHR1Q03591 330 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 SPIDRQ14159 915 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 GRB7Q14451 532 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 HES3Q5TGS1 186 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 KLHL35Q6PF15 583 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 PAQR3Q6TCH7 311 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 RBM44Q6ZP01 1051 aaKnown RBP16.97■□□□□ 0.31
ERCC3-207ENST00000490062 SLITRK4Q8IW52 837 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 GSPT2Q8IYD1 628 aaKnown RBP16.97■□□□□ 0.31
ERCC3-207ENST00000490062 OR4D9Q8NGE8 314 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 OR5AR1Q8NGP9 310 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 MAGEC3Q8TD91 643 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 AENQ8WTP8 325 aaKnown RBP16.97■□□□□ 0.31
ERCC3-207ENST00000490062 ASB11Q8WXH4 323 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 TSPAN17Q96FV3 270 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 FOPNLQ96NB1 174 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 FERD3LQ96RJ6 166 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 DHRS4Q9BTZ2 278 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 MENTQ9BUN1 341 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 TBC1D10AQ9BXI6 508 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 SEMA5BQ9P283 1151 aa16.97■□□□□ 0.31
ERCC3-207ENST00000490062 TMX2-CTNND1H3BSU7 103 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 C1orf105O95561 183 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 C9P02748 559 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 PROS1P07225 676 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 ITGA2BP08514 1039 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 CSF2RBP32927 897 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 PDAP1Q13442 181 aaKnown RBP16.96■□□□□ 0.31
ERCC3-207ENST00000490062 TRA2AQ13595 282 aaKnown RBP eCLIP16.96■□□□□ 0.316e-7■□□□□ 10.5
ERCC3-207ENST00000490062 EFTUD2Q15029 972 aaKnown RBP eCLIP16.96■□□□□ 0.311e-5■■■□□ 15.7
ERCC3-207ENST00000490062 TMEM71Q6P5X7 295 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 CCDC91Q7Z6B0 441 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 PIM3Q86V86 326 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 ZNF761Q86XN6 746 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-207ENST00000490062 CPNE9Q8IYJ1 553 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 CARFQ8N187 725 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 Q8N9G6 341 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-207ENST00000490062 PHC3Q8NDX5 983 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 OR52E1Q8NGJ3 308 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 CAVIN3Q969G5 261 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 ISL2Q96A47 359 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 RAD51AP1Q96B01 352 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 FAM136AQ96C01 138 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 ELMO2Q96JJ3 720 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 TMEM74Q96NL1 305 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 DEPDC7Q96QD5 511 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 PARD6BQ9BYG5 372 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 SYTL2Q9HCH5 934 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 CLCA2Q9UQC9 943 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 MTO1Q9Y2Z2 717 aaKnown RBP16.96■□□□□ 0.31
ERCC3-207ENST00000490062 SPEGQ15772 3267 aa16.96■□□□□ 0.31
ERCC3-207ENST00000490062 HMX2A2RU54 273 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 MATN2O00339 956 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 SLC16A5O15375 505 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 TOX3O15405 576 aaPredicted RBP16.95■□□□□ 0.3
ERCC3-207ENST00000490062 TPBGLP0DKB5 382 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 ERGP11308 486 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 CNTFP26441 200 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 SHMT2P34897 504 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 SERPINB9P50453 376 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 IL2P60568 153 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 ABRQ12979 859 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 SP140Q13342 867 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 KRT33BQ14525 404 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 SLC29A2Q14542 456 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 ISXQ2M1V0 245 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 TMEM207Q6UWW9 146 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 PLXDC1Q8IUK5 500 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 CHCHD4Q8N4Q1 142 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 NKAPQ8N5F7 415 aaKnown RBP16.95■□□□□ 0.3
ERCC3-207ENST00000490062 HMGCLL1Q8TB92 370 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 ATXN7L3BQ96GX2 97 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 PAFAH2Q99487 392 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 RAB11FIP5Q9BXF6 653 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 PPCSQ9HAB8 311 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 OR6C2Q9NZP2 312 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 NFS1Q9Y697 457 aa16.95■□□□□ 0.3
ERCC3-207ENST00000490062 OR5K3A6NET4 321 aa16.94■□□□□ 0.3
ERCC3-207ENST00000490062 MYO1CO00159 1063 aa16.94■□□□□ 0.3
ERCC3-207ENST00000490062 CASC3O15234 703 aaKnown RBP16.94■□□□□ 0.3
ERCC3-207ENST00000490062 FAM155BO75949 473 aa16.94■□□□□ 0.3
ERCC3-207ENST00000490062 CATP04040 527 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms