RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 COPG2Q9UBF2 871 aa13.04□□□□□ -0.32
TRAIP-210ENST00000489948 ADAMTS6Q9UKP5 1117 aa13.04□□□□□ -0.32
TRAIP-210ENST00000489948 WDR37Q9Y2I8 494 aa13.04□□□□□ -0.32
TRAIP-210ENST00000489948 CABIN1Q9Y6J0 2220 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 KIR2DS5A0A0G2JLQ3 304 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 A0A0G2JNG1 304 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 ARHGEF33A8MVX0 844 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 KIR2DS3K7RE56 304 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 MYO1CO00159 1063 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 ARHGAP33O14559 1287 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 KLK8O60259 260 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 LRP3O75074 770 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 C1orf105O95561 183 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 CELA2BP08218 269 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-210ENST00000489948 MTHFD1P11586 935 aaKnown RBP13.03□□□□□ -0.32
TRAIP-210ENST00000489948 MTHFD2P13995 350 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 RPL10P27635 214 aaKnown RBP13.03□□□□□ -0.32
TRAIP-210ENST00000489948 NDUFS1P28331 727 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 OAS2P29728 719 aaKnown RBP13.03□□□□□ -0.32
TRAIP-210ENST00000489948 CCT8P50990 548 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 KIR2DS5Q14953 304 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 CLCA4Q14CN2 919 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 SHBQ15464 509 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 TGFBIQ15582 683 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 LPAL2Q16609 132 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.03□□□□□ -0.32
TRAIP-210ENST00000489948 C16orf46Q6P387 395 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 ZYG11AQ6WRX3 759 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 KANSL1Q7Z3B3 1105 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 TAF8Q7Z7C8 310 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 GPSM1Q86YR5 675 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 TBC1D21Q8IYX1 336 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 SPDYE1Q8NFV5 336 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-210ENST00000489948 FAM76AQ8TAV0 307 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 SKA2Q8WVK7 121 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-210ENST00000489948 TFGQ92734 400 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-210ENST00000489948 DLG3Q92796 817 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 CCDC126Q96EE4 140 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 SCYL1Q96KG9 808 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 NUSAP1Q9BXS6 441 aaKnown RBP13.03□□□□□ -0.32
TRAIP-210ENST00000489948 MVB12BQ9H7P6 319 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 PRDM8Q9NQV8 689 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 POT1Q9NUX5 634 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 RNF112Q9ULX5 631 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 ADAMTS9Q9P2N4 1935 aa13.03□□□□□ -0.32
TRAIP-210ENST00000489948 RALGAPA1Q6GYQ0 2036 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 ANKRD12Q6UB98 2062 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 PATE3B3GLJ2 98 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 G3V2L1 256 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 SCAMP1O15126 338 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 BIRC5O15392 142 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 FFAR2O15552 330 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 EML2O95834 649 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 ZNF883P0CG24 379 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 ERGP11308 486 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 TAC1P20366 129 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 ATP5F1P24539 256 aaPredicted RBP13.02□□□□□ -0.33
TRAIP-210ENST00000489948 SERPINB4P48594 390 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 HNMTP50135 292 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 WDR4P57081 412 aaKnown RBP13.02□□□□□ -0.33
TRAIP-210ENST00000489948 UBE2IP63279 158 aaKnown RBP13.02□□□□□ -0.33
TRAIP-210ENST00000489948 PCLAFQ15004 111 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 SEPT7Q16181 437 aaKnown RBP13.02□□□□□ -0.33
TRAIP-210ENST00000489948 RPE65Q16518 533 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 PHKG1Q16816 387 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 HLA-BQ31612 363 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 METTL2BQ6P1Q9 378 aaKnown RBP13.02□□□□□ -0.33
TRAIP-210ENST00000489948 IYDQ6PHW0 289 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 FRA10AC1Q70Z53 315 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 C17orf82Q86X59 251 aaPredicted RBP13.02□□□□□ -0.33
TRAIP-210ENST00000489948 SLC22A9Q8IVM8 553 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 RBM12BQ8IXT5 1001 aaKnown RBP13.02□□□□□ -0.33
TRAIP-210ENST00000489948 TCAIMQ8N3R3 496 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 SFRP1Q8N474 314 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 PHC3Q8NDX5 983 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 ARMC2Q8NEN0 867 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 LMX1AQ8TE12 382 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 UBTD2Q8WUN7 234 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 ZFPM2Q8WW38 1151 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 C12orf66Q96MD2 445 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 INSM2Q96T92 566 aaPredicted RBP13.02□□□□□ -0.33
TRAIP-210ENST00000489948 UNKQ9C0B0 810 aaKnown RBP13.02□□□□□ -0.33
TRAIP-210ENST00000489948 ARRDC1-AS1Q9H2J1 176 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 TRIT1Q9H3H1 467 aaKnown RBP13.02□□□□□ -0.33
TRAIP-210ENST00000489948 POLG2Q9UHN1 485 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 PSMD13Q9UNM6 376 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 PDE10AQ9Y233 779 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 ASF1AQ9Y294 204 aa13.02□□□□□ -0.33
TRAIP-210ENST00000489948 PABPN1LA6NDY0 278 aaKnown RBP13.01□□□□□ -0.33
TRAIP-210ENST00000489948 NEMP2A6NFY4 417 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 A8MT66 165 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 STX16-NPEPL1H3BU86 382 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 STX16O14662 325 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 KHNYNO15037 678 aaKnown RBP13.01□□□□□ -0.33
TRAIP-210ENST00000489948 PCDHGA12O60330 932 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 SNX2O60749 519 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 SMIM24O75264 130 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 IPO13O94829 963 aaKnown RBP13.01□□□□□ -0.33
TRAIP-210ENST00000489948 BPGMP07738 259 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 TPBGLP0DKB5 382 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms