RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 NSMCE4AQ9NXX6 385 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 TMEM181Q9P2C4 612 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 OSGIN1Q9UJX0 560 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 IGHV4-61A0A0C4DH41 118 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 TMEM221A6NGB7 291 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 NR5A2O00482 541 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 GAPDHSO14556 408 aaPredicted RBP4.66□□□□□ -1.66
CCDC39-206ENST00000489868 WDPCPO95876 746 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 IGHV4-59P01825 116 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 DNASE1P24855 282 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 WNT5AP41221 380 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 NKX2-1P43699 371 aaPredicted RBP4.66□□□□□ -1.66
CCDC39-206ENST00000489868 CDH13P55290 713 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 FCN2Q15485 313 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 CCDC6Q16204 474 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 TMPRSS11FQ6ZWK6 438 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 MINDY1Q8N5J2 469 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 MAPKAPK5-AS1Q8N8E1 139 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 PAPD5Q8NDF8 572 aaKnown RBP4.66□□□□□ -1.66
CCDC39-206ENST00000489868 MOSPD2Q8NHP6 518 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 PRPF31Q8WWY3 499 aaKnown RBP4.66□□□□□ -1.66
CCDC39-206ENST00000489868 TMEM143Q96AN5 459 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 TMCO6Q96DC7 493 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 BTBD10Q9BSF8 475 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 LAT2Q9GZY6 243 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 SLC35C2Q9NQQ7 365 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 ECHDC1Q9NTX5 307 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 GIMAP4Q9NUV9 329 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 CRNNQ9UBG3 495 aaPredicted RBP4.66□□□□□ -1.66
CCDC39-206ENST00000489868 RIPK3Q9Y572 518 aa4.66□□□□□ -1.66
CCDC39-206ENST00000489868 SNED1Q8TER0 1413 aa4.65□□□□□ -1.66
CCDC39-206ENST00000489868 ADAM20O43506 726 aa4.65□□□□□ -1.67
CCDC39-206ENST00000489868 ZNF821O75541 412 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-206ENST00000489868 ZNF26P17031 533 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-206ENST00000489868 SAT1P21673 171 aa4.65□□□□□ -1.67
CCDC39-206ENST00000489868 CA4P22748 312 aa4.65□□□□□ -1.67
CCDC39-206ENST00000489868 HNRNPKP61978 463 aaKnown RBP eCLIP4.65□□□□□ -1.67
CCDC39-206ENST00000489868 PRKG2Q13237 762 aa4.65□□□□□ -1.67
CCDC39-206ENST00000489868 NR1D2Q14995 579 aa4.65□□□□□ -1.67
CCDC39-206ENST00000489868 CFAP161Q6P656 301 aa4.65□□□□□ -1.67
CCDC39-206ENST00000489868 SLC16A9Q7RTY1 509 aa4.65□□□□□ -1.67
CCDC39-206ENST00000489868 ARHGAP24Q8N264 748 aa4.65□□□□□ -1.67
CCDC39-206ENST00000489868 LMF2Q9BU23 707 aaKnown RBP4.65□□□□□ -1.67
CCDC39-206ENST00000489868 S1PR5Q9H228 398 aa4.65□□□□□ -1.67
CCDC39-206ENST00000489868 CCDC68Q9H2F9 335 aa4.65□□□□□ -1.67
CCDC39-206ENST00000489868 TMEM5Q9Y2B1 443 aa4.65□□□□□ -1.67
CCDC39-206ENST00000489868 LOC101059948A0A1B0GTJ6 334 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 GLOD5A6NK44 160 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 ATP6V0E1O15342 81 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 TRMUO75648 421 aaKnown RBP4.64□□□□□ -1.67
CCDC39-206ENST00000489868 PIGNO95427 931 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 EFNA1P20827 205 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-206ENST00000489868 HILS1P60008 231 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 BAATQ14032 418 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-206ENST00000489868 TMEM187Q14656 261 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 RALBP1Q15311 655 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 GTDC1Q4AE62 458 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 PHLDA2Q53GA4 152 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 RNASEH2BQ5TBB1 312 aaKnown RBP4.64□□□□□ -1.67
CCDC39-206ENST00000489868 CYP4A22Q5TCH4 519 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 ZNF790Q6PG37 636 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 TMEM173Q86WV6 379 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-206ENST00000489868 KBTBD8Q8NFY9 601 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.64□□□□□ -1.67
CCDC39-206ENST00000489868 MRPL15Q9P015 296 aaKnown RBP4.64□□□□□ -1.67
CCDC39-206ENST00000489868 CACNG5Q9UF02 275 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 SNX8Q9Y5X2 465 aa4.64□□□□□ -1.67
CCDC39-206ENST00000489868 ERAL1O75616 437 aaKnown RBP4.63□□□□□ -1.67
CCDC39-206ENST00000489868 TPOP07202 933 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 OR2T7P0C7T2 308 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 PLA2G4BP0C869 781 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 ZNF883P0CG24 379 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 CASP2P42575 452 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 GPR17Q13304 367 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 C15orf59Q2T9L4 293 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-206ENST00000489868 SPDYCQ5MJ68 293 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 ZNF497Q6ZNH5 498 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 COMMD2Q86X83 199 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 TMEM139Q8IV31 216 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 ZNF248Q8NDW4 579 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 APPL2Q8NEU8 664 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 OR2T11Q8NH01 316 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 IRGQQ8WZA9 623 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 JAKMIP2Q96AA8 810 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 FNBP1Q96RU3 617 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 GOLPH3LQ9H4A5 285 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 Q9N2K0 584 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 EQTNQ9NQ60 294 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 SDR39U1Q9NRG7 319 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-206ENST00000489868 INTS9Q9NV88 658 aaKnown RBP4.63□□□□□ -1.67
CCDC39-206ENST00000489868 B3GAT1Q9P2W7 334 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 RPS6KA6Q9UK32 745 aa4.63□□□□□ -1.67
CCDC39-206ENST00000489868 MRPS28Q9Y2Q9 187 aaKnown RBP4.63□□□□□ -1.67
CCDC39-206ENST00000489868 LOC100509620A0A075B734 347 aa4.62□□□□□ -1.67
CCDC39-206ENST00000489868 IGLV1-44P01699 117 aa4.62□□□□□ -1.67
CCDC39-206ENST00000489868 GJA1P17302 382 aa4.62□□□□□ -1.67
CCDC39-206ENST00000489868 ERVK11-1P61568 191 aa4.62□□□□□ -1.67
CCDC39-206ENST00000489868 PMP22Q01453 160 aa4.62□□□□□ -1.67
CCDC39-206ENST00000489868 SP3Q02447 781 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms