RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-229	ENST00000489583	KCNN4	O15554	427 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	IPO13	O94829	963 aa	Known RBP	18.85	■□□□□ 0.61
APTX-229	ENST00000489583	IPO7	O95373	1038 aa	Known RBP	18.85	■□□□□ 0.61
APTX-229	ENST00000489583	ST6GAL1	P15907	406 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	PSMB4	P28070	264 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	MC4R	P32245	332 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	CA5A	P35218	305 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	RORA	P35398	523 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	FOLR3	P41439	243 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	EIF3E	P60228	445 aa	Known RBP	18.85	■□□□□ 0.61
APTX-229	ENST00000489583	PRKG2	Q13237	762 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	ATP1A4	Q13733	1029 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	VWA5B1	Q5TIE3	1220 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	TC2N	Q8N9U0	490 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	GLIS1	Q8NBF1	620 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	OR52E1	Q8NGJ3	308 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	OR13C4	Q8NGS5	318 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	TFG	Q92734	400 aa	Predicted RBP	18.85	■□□□□ 0.61
APTX-229	ENST00000489583	TCTN2	Q96GX1	697 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	CALR3	Q96L12	384 aa	Known RBP	18.85	■□□□□ 0.61
APTX-229	ENST00000489583	PANX2	Q96RD6	677 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	HGH1	Q9BTY7	390 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	NUDT9	Q9BW91	350 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	ILKAP	Q9H0C8	392 aa	Predicted RBP	18.85	■□□□□ 0.61
APTX-229	ENST00000489583	ACTR10	Q9NZ32	417 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	LUZP4	Q9P127	313 aa		18.85	■□□□□ 0.61
APTX-229	ENST00000489583	LDB2	O43679	373 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	OR2B3	O76000	313 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	ATXN8OS	P0DMR3	200 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	SHMT2	P34897	504 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	OTUD4	Q01804	1114 aa	Known RBP	18.84	■□□□□ 0.61
APTX-229	ENST00000489583	RAPSN	Q13702	412 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	LAMB3	Q13751	1172 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	SSPN	Q14714	243 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	EIF2S3L	Q2VIR3	472 aa	Known RBP	18.84	■□□□□ 0.61
APTX-229	ENST00000489583	SYTL3	Q4VX76	610 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	SLC6A19	Q695T7	634 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	C11orf63	Q6NUN7	778 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	TMTC1	Q8IUR5	882 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	LILRA3	Q8N6C8	439 aa	Predicted RBP	18.84	■□□□□ 0.61
APTX-229	ENST00000489583	PHC3	Q8NDX5	983 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	TRAPPC9	Q96Q05	1148 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	TTC1	Q99614	292 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	PITPNM3	Q9BZ71	974 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	KLHL25	Q9H0H3	589 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	GOLPH3	Q9H4A6	298 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	IFT80	Q9P2H3	777 aa	Predicted RBP	18.84	■□□□□ 0.61
APTX-229	ENST00000489583	POLG2	Q9UHN1	485 aa		18.84	■□□□□ 0.61
APTX-229	ENST00000489583	BTN3A3	O00478	584 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	TJP3	O95049	919 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	RBP3	P10745	1247 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	ACRV1	P26436	265 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	CYLC1	P35663	651 aa	Predicted RBP	18.83	■□□□□ 0.6
APTX-229	ENST00000489583	DCD	P81605	110 aa	Known RBP	18.83	■□□□□ 0.6
APTX-229	ENST00000489583	XIAP	P98170	497 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	LCN10	Q6JVE6	187 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	SPESP1	Q6UW49	350 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	FAM198B	Q6UWH4	519 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	ARHGEF18	Q6ZSZ5	1173 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	ZBTB2	Q8N680	514 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	ACTL9	Q8TC94	416 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	SMAD5	Q99717	465 aa	Known RBP	18.83	■□□□□ 0.6
APTX-229	ENST00000489583	AP1M1	Q9BXS5	423 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	OR52A5	Q9H2C5	316 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	C10orf88	Q9H8K7	445 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	SRPK3	Q9UPE1	567 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	ASF1A	Q9Y294	204 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	EFR3B	Q9Y2G0	817 aa		18.83	■□□□□ 0.6
APTX-229	ENST00000489583	PTRH2	Q9Y3E5	179 aa	Known RBP	18.83	■□□□□ 0.6
APTX-229	ENST00000489583		A1L4Q6	167 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	GOLGA6L9	A6NEM1	432 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	AGAP14	A8MT82	685 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	TCP11X1	B4DZS4	312 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	LIN7A	O14910	233 aa	Predicted RBP	18.82	■□□□□ 0.6
APTX-229	ENST00000489583	AP2A2	O94973	939 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	GAS8	O95995	478 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	FTH1	P02794	183 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	ADRA1A	P35348	466 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	ZNF140	P52738	457 aa	Predicted RBP	18.82	■□□□□ 0.6
APTX-229	ENST00000489583	PLOD1	Q02809	727 aa	Predicted RBP	18.82	■□□□□ 0.6
APTX-229	ENST00000489583	CYP2A13	Q16696	494 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	IRAK1BP1	Q5VVH5	260 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	CDHR3	Q6ZTQ4	885 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	SERPINA9	Q86WD7	417 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	ZADH2	Q8N4Q0	377 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	C19orf47	Q8N9M1	422 aa	Known RBP	18.82	■□□□□ 0.6
APTX-229	ENST00000489583	PROKR1	Q8TCW9	393 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	DENND1A	Q8TEH3	1009 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	SPATA13	Q96N96	652 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	XKR8	Q9H6D3	395 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	SMARCAL1	Q9NZC9	954 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	B3GNT3	Q9Y2A9	372 aa		18.82	■□□□□ 0.6
APTX-229	ENST00000489583	TDRKH	Q9Y2W6	561 aa	Known RBP	18.82	■□□□□ 0.6
APTX-229	ENST00000489583	UTP20	O75691	2785 aa	Known RBP	18.82	■□□□□ 0.6
APTX-229	ENST00000489583	TNRC6A	Q8NDV7	1962 aa	Known RBP	18.82	■□□□□ 0.6
APTX-229	ENST00000489583	SGTA	O43765	313 aa		18.81	■□□□□ 0.6
APTX-229	ENST00000489583	SEMA7A	O75326	666 aa		18.81	■□□□□ 0.6
APTX-229	ENST00000489583	PVR	P15151	417 aa		18.81	■□□□□ 0.6
APTX-229	ENST00000489583	CACNG1	Q06432	222 aa		18.81	■□□□□ 0.6
APTX-229	ENST00000489583	FAM69B	Q5VUD6	431 aa		18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms