RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SLC23A2Q9UGH3 650 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 FETUBQ9UGM5 382 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 DNMT3AQ9Y6K1 912 aaPredicted RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 CACNA1GO43497 2377 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 ITPR1Q14643 2758 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 UNC13CQ8NB66 2214 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 PRAMEF33A0A0G2JMD5 474 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 PDZK1P1A8MUH7 402 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 SGTAO43765 313 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 PRAMEF10O60809 474 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 SYF2O95926 243 aaKnown RBP10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 VIPP01282 170 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 AHSGP02765 367 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 LIPCP11150 499 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 OGNP20774 298 aaKnown RBP10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 ATP5DP30049 168 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 ETV5P41161 510 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 LEPRP48357 1165 aaKnown RBP10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 CSRP3P50461 194 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 MAPK10P53779 464 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 TIAL1Q01085 375 aaKnown RBP eCLIP10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 CFHR1Q03591 330 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 CACNG1Q06432 222 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 VAC14Q08AM6 782 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 DMPKQ09013 629 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 CLN3Q13286 438 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 NAB1Q13506 487 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 RASA2Q15283 850 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 KLHL38Q2WGJ6 581 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 SOWAHCQ53LP3 525 aaPredicted RBP10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 GPRC6AQ5T6X5 926 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 AGBL2Q5U5Z8 902 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 AGAP9Q5VTM2 703 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 ZNF549Q6P9A3 640 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 ADGRD1Q6QNK2 874 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 ABRAXAS1Q6UWZ7 409 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 PACS1Q6VY07 963 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 C11orf96Q7Z7L8 435 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 SLC26A11Q86WA9 606 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 SERPINA9Q86WD7 417 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 LRRC6Q86X45 466 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 TDRPQ86YL5 185 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 SPNS2Q8IVW8 549 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 TRIM48Q8IWZ4 208 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 RBM12BQ8IXT5 1001 aaKnown RBP10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 LMNTD2Q8IXW0 634 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 NXPE1Q8N323 547 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 PPM1NQ8N819 430 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 RCBTB1Q8NDN9 531 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 ACVR1CQ8NER5 493 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 ZNF398Q8TD17 642 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 SNRNP27Q8WVK2 155 aaKnown RBP10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 LPGAT1Q92604 370 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 USP7Q93009 1102 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 ZBTB9Q96C00 473 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 ZNF514Q96K75 400 aaPredicted RBP10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 FAM167BQ9BTA0 163 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 P2RY12Q9H244 342 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 ASB8Q9H765 288 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 PPCSQ9HAB8 311 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 FBXO6Q9NRD1 293 aaPredicted RBP10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 POT1Q9NUX5 634 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 ZFATQ9P243 1243 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 ADAM21Q9UKJ8 722 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 FBXO5Q9UKT4 447 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 DNAJC16Q9Y2G8 782 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 MED16Q9Y2X0 877 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 PTPRQQ9UMZ3 2332 aa10.33□□□□□ -0.76
SCAMP4-208ENST00000489554 EXOC1LA0A1B0GW35 172 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 KLHL33A6NCF5 533 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 EIF4E1BA6NMX2 242 aaKnown RBP10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 B4E171 279 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 AGRPO00253 132 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 OR1I1O60431 355 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 HAUS5O94927 633 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 CCL4P13236 92 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 MSH3P20585 1137 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 ITGALP20701 1170 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 ACRV1P26436 265 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 AKT1P31749 480 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 TSPAN7P41732 249 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 HALP42357 657 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 RHDQ02161 417 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 SEPT7Q16181 437 aaKnown RBP10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 GPR33Q49SQ1 333 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 FASTKD1Q53R41 847 aaKnown RBP10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 ZRANB3Q5FWF4 1079 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 TNFAIP8L3Q5GJ75 292 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 CTSL3PQ5NE16 218 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 CNSTQ6PJW8 725 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 KIAA0408Q6ZU52 694 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 TMEM26Q6ZUK4 368 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 AMZ2Q86W34 360 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 ZC3HC1Q86WB0 502 aaKnown RBP10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 PLXDC1Q8IUK5 500 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 CTAGE3PQ8IX95 158 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 CYP4X1Q8N118 509 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 RASGEF1AQ8N9B8 481 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 LSM14AQ8ND56 463 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms