RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 MVB12BQ9H7P6 319 aa12.01□□□□□ -0.49
CPSF3-204ENST00000489403 ARNT2Q9HBZ2 717 aa12.01□□□□□ -0.49
CPSF3-204ENST00000489403 GPR83Q9NYM4 423 aa12.01□□□□□ -0.49
CPSF3-204ENST00000489403 SERTAD3Q9UJW9 196 aa12.01□□□□□ -0.49
CPSF3-204ENST00000489403 EFR3BQ9Y2G0 817 aa12.01□□□□□ -0.49
CPSF3-204ENST00000489403 PCDHA3Q9Y5H8 950 aa12.01□□□□□ -0.49
CPSF3-204ENST00000489403 PCDHA13Q9Y5I0 950 aa12.01□□□□□ -0.49
CPSF3-204ENST00000489403 PIKFYVEQ9Y2I7 2098 aa12.01□□□□□ -0.49
CPSF3-204ENST00000489403 ICE1Q9Y2F5 2266 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 USP9XQ93008 2570 aaPredicted RBP12□□□□□ -0.49
CPSF3-204ENST00000489403 H3BMH7 237 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 H7C0S8 307 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 ZNF749O43361 778 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 CTNNA2P26232 953 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 PTPN7P35236 360 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 PRKG2Q13237 762 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 MRPL49Q13405 166 aaKnown RBP12□□□□□ -0.49
CPSF3-204ENST00000489403 BOP1Q14137 746 aaKnown RBP12□□□□□ -0.49
CPSF3-204ENST00000489403 GPR33Q49SQ1 333 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 AADACL2Q6P093 401 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 DARS2Q6PI48 645 aaKnown RBP12□□□□□ -0.49
CPSF3-204ENST00000489403 SPESP1Q6UW49 350 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 SERPINA9Q86WD7 417 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 HPS6Q86YV9 775 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 C19orf47Q8N9M1 422 aaKnown RBP12□□□□□ -0.49
CPSF3-204ENST00000489403 RNF214Q8ND24 703 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 TFGQ92734 400 aaPredicted RBP12□□□□□ -0.49
CPSF3-204ENST00000489403 OSBPL8Q9BZF1 889 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 VPS37BQ9H9H4 285 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 FAM60AQ9NP50 221 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 SLAMF7Q9NQ25 335 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 FEZ2Q9UHY8 353 aaPredicted RBP12□□□□□ -0.49
CPSF3-204ENST00000489403 G3BP2Q9UN86 482 aaKnown RBP12□□□□□ -0.49
CPSF3-204ENST00000489403 ICKQ9UPZ9 632 aa12□□□□□ -0.49
CPSF3-204ENST00000489403 USP9YO00507 2555 aaPredicted RBP12□□□□□ -0.49
CPSF3-204ENST00000489403 TCP11X1B4DZS4 312 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 C9J4A7 227 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 MAP3K7O43318 606 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 HCRTR1O43613 425 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 KLF7O75840 302 aaPredicted RBP11.99□□□□□ -0.49
CPSF3-204ENST00000489403 STK10O94804 968 aaKnown RBP11.99□□□□□ -0.49
CPSF3-204ENST00000489403 PTMSP20962 102 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 AGXTP21549 392 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 OTX2P32243 289 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 GABRA4P48169 554 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 RRADP55042 308 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 RPA4Q13156 261 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 RAPSNQ13702 412 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 ZIC1Q15915 447 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 DBN1Q16643 649 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 DEFB110Q30KQ9 67 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 KCTD11Q693B1 232 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 TRIM73Q86UV7 250 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 RAB43Q86YS6 212 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 PIANPQ8IYJ0 282 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 CCDC170Q8IYT3 715 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 CLDN19Q8N6F1 224 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 OR5AR1Q8NGP9 310 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 PNPLA2Q96AD5 504 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 SGSM3Q96HU1 749 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 PPP1R2P1Q96PQ5 205 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 DPH2Q9BQC3 489 aaPredicted RBP11.99□□□□□ -0.49
CPSF3-204ENST00000489403 DHRS4Q9BTZ2 278 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 TSPY26PQ9H489 355 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 NLE1Q9NVX2 485 aaPredicted RBP11.99□□□□□ -0.49
CPSF3-204ENST00000489403 CUEDC1Q9NWM3 386 aaPredicted RBP11.99□□□□□ -0.49
CPSF3-204ENST00000489403 PADI2Q9Y2J8 665 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 CCDC88CQ9P219 2028 aa11.99□□□□□ -0.49
CPSF3-204ENST00000489403 ESPL1Q14674 2120 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 RCCD1A6NED2 376 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 CTSBP07858 339 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 HBQ1P09105 142 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 GSTM1P09488 218 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 CBSLP0DN79 551 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 UGT2B7P16662 529 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 TPH1P17752 444 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 CBSP35520 551 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 GSTM4Q03013 218 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 SSPNQ14714 243 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 POU6F1Q14863 301 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 EIF2S3LQ2VIR3 472 aaKnown RBP11.98□□□□□ -0.49
CPSF3-204ENST00000489403 VWA5B1Q5TIE3 1220 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 C1orf189Q5VU69 101 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 RHBDD2Q6NTF9 364 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 ZNF449Q6P9G9 518 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 UNC5AQ6ZN44 842 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 TAS2R42Q7RTR8 314 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 MRGPREQ86SM8 312 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 GPR135Q8IZ08 494 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 FLVCR1-AS1Q8TAF5 88 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 STYXQ8WUJ0 223 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 ALG3Q92685 438 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 N4BP2L2Q92802 583 aaPredicted RBP11.98□□□□□ -0.49
CPSF3-204ENST00000489403 CDKN2AIPNLQ96HQ2 116 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 OR2A14Q96R47 310 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 SLC29A3Q9BZD2 475 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 CASS4Q9NQ75 786 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 SPHK1Q9NYA1 384 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 MAP10Q9P2G4 905 aa11.98□□□□□ -0.49
CPSF3-204ENST00000489403 PRSS21Q9Y6M0 314 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms