RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CDH6P55285 790 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 RBPJQ06330 500 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 DMPKQ09013 629 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 XRCC4Q13426 336 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 NFE2L1Q14494 772 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 NKAIN1Q4KMZ8 207 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 RHBDD2Q6NTF9 364 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 MON1BQ7L1V2 547 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 CXXC5Q7LFL8 322 aaKnown RBP8.85□□□□□ -0.99
SSBP1-212ENST00000489378 TMEM200AQ86VY9 491 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 AMZ2Q86W34 360 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 TEX26Q8N6G2 289 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 OR4E2Q8NGC2 313 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 NSMCE1Q8WV22 266 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 CPLX3Q8WVH0 158 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 ZNF653Q96CK0 615 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 NRTNQ99748 197 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 STK33Q9BYT3 514 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 POLR1EQ9GZS1 481 aaKnown RBP8.85□□□□□ -0.99
SSBP1-212ENST00000489378 PCDH9Q9HC56 1237 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 RAB6BQ9NRW1 208 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 DHCR7Q9UBM7 475 aaKnown RBP8.85□□□□□ -0.99
SSBP1-212ENST00000489378 HCFC1P51610 2035 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 TRAV17A0A0B4J275 112 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 GSAPA4D1B5 854 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 POP7O75817 140 aaKnown RBP8.84□□□□□ -0.99
SSBP1-212ENST00000489378 OR2B3O76000 313 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 SLC4A1P02730 911 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 CALB1P05937 261 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 HSP90AA1P07900 732 aaKnown RBP8.84□□□□□ -0.99
SSBP1-212ENST00000489378 CD63P08962 238 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 IGFBP2P18065 325 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 PRDX3P30048 256 aaKnown RBP8.84□□□□□ -0.99
SSBP1-212ENST00000489378 HCAR3P49019 387 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 CTSCP53634 463 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 DCDC1P59894 354 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 RPL26P61254 145 aaKnown RBP8.84□□□□□ -0.99
SSBP1-212ENST00000489378 PMP22Q01453 160 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 NIPAL4Q0D2K0 466 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 TMEM115Q12893 351 aaPredicted RBP8.84□□□□□ -0.99
SSBP1-212ENST00000489378 CEBPEQ15744 281 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 CLEC16AQ2KHT3 1053 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 DEFB110Q30KQ9 67 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 TMCO3Q6UWJ1 677 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 GPR135Q8IZ08 494 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 ARRDC2Q8TBH0 407 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 PROKR1Q8TCW9 393 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 AP1M1Q9BXS5 423 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 PITPNM3Q9BZ71 974 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 WWP1Q9H0M0 922 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 KIR3DX1Q9H7L2 352 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 GPAMQ9HCL2 828 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 FAM60AQ9NP50 221 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 RPL26L1Q9UNX3 145 aaKnown RBP8.84□□□□□ -0.99
SSBP1-212ENST00000489378 SHOC2Q9UQ13 582 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 TLN2Q9Y4G6 2542 aa8.84□□□□□ -0.99
SSBP1-212ENST00000489378 DYTNA2CJ06 578 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 ANKRD66B4E2M5 251 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 BTN3A3O00478 584 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 RASAL1O95294 804 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 CRYABP02511 175 aaKnown RBP8.83□□□□□ -1
SSBP1-212ENST00000489378 PIRTP0C851 137 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 MX2P20592 715 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 PSMA2P25787 234 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 ADAM8P78325 824 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 TMPRSS15P98073 1019 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 PRKAA1Q13131 559 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 TUBB8Q3ZCM7 444 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 PDPK2PQ6A1A2 396 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 ALG1LQ6GMV1 187 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 DCUN1D2Q6PH85 259 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 SHISA6Q6ZSJ9 500 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 BIVMQ86UB2 503 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 FAM20CQ8IXL6 584 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 ZNF655Q8N720 491 aaPredicted RBP8.83□□□□□ -1
SSBP1-212ENST00000489378 ANKRD20A12PQ8NF67 263 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 OR11G2Q8NGC1 345 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 DNAJB8Q8NHS0 232 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 TEKT4Q8WW24 435 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 ZFPM2Q8WW38 1151 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 NACC2Q96BF6 587 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 C12orf66Q96MD2 445 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 TIGD1Q96MW7 591 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 LIME1Q9H400 295 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 DEF6Q9H4E7 631 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 ZFYVE1Q9HBF4 777 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 SAMSN1Q9NSI8 373 aaKnown RBP8.83□□□□□ -1
SSBP1-212ENST00000489378 NFKBIL1Q9UBC1 381 aaPredicted RBP8.83□□□□□ -1
SSBP1-212ENST00000489378 HOOK1Q9UJC3 728 aaKnown RBP8.83□□□□□ -1
SSBP1-212ENST00000489378 ZNF835Q9Y2P0 537 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 TTLL3Q9Y4R7 772 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 AP1M2Q9Y6Q5 423 aa8.83□□□□□ -1
SSBP1-212ENST00000489378 C17orf113A0A1B0GUU1 675 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 BTN3A1O00481 513 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 ZNHIT1O43257 154 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 OIP5O43482 229 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 PRPSAP2O60256 369 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 KCNJ13O60928 360 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 SLCO2B1O94956 709 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 ITGAXP20702 1163 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms