RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 SEMA7AO75326 666 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 VPS4BO75351 444 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 TMEM63AO94886 807 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 RECKO95980 971 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 CBSLP0DN79 551 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 ACRV1P26436 265 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 NDUFS1P28331 727 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 OTX2P32243 289 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 CBSP35520 551 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 GDF10P55107 478 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 IZUMO3Q5VZ72 239 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 AMIGO1Q86WK6 493 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 EFCAB3Q8N7B9 438 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 ZFPM2Q8WW38 1151 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 TFGQ92734 400 aaPredicted RBP15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 SLC7A5P2Q9GIP4 190 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 FANCEQ9HB96 536 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 LRRC4CQ9HCJ2 640 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 SPHK1Q9NYA1 384 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 ACTR10Q9NZ32 417 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 VPS4AQ9UN37 437 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 ICKQ9UPZ9 632 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 KLHL20Q9Y2M5 609 aa15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 TDRKHQ9Y2W6 561 aaKnown RBP15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 EPN1Q9Y6I3 576 aaPredicted RBP15.4■□□□□ 0.06
ERGIC3-217ENST00000488935 CFAP99D6REC4 459 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 IFRD1O00458 451 aaPredicted RBP15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 KRT86O43790 486 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 STK10O94804 968 aaKnown RBP15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 TPBGLP0DKB5 382 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 CYLC1P35663 651 aaPredicted RBP15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 RWDD2BP57060 319 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 GSDMDP57764 484 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 COPS2P61201 443 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 MRPL49Q13405 166 aaKnown RBP15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 KYNUQ16719 465 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 EIF2S3LQ2VIR3 472 aaKnown RBP15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 MLIPQ5VWP3 458 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 RAD9BQ6WBX8 426 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 PRUNE1Q86TP1 453 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 C2orf73Q8N5S3 287 aaPredicted RBP15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 C19orf60Q96EN9 201 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 CDKN2AIPNLQ96HQ2 116 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 NLNQ9BYT8 704 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 MLXIPLQ9NP71 852 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 IMPACTQ9P2X3 320 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 HEBP2Q9Y5Z4 205 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 ANKRD12Q6UB98 2062 aa15.39■□□□□ 0.05
ERGIC3-217ENST00000488935 IGLV3-16A0A075B6K0 115 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 TRBV5-4A0A0C4DH59 114 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 A1L4Q6 167 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 GRID2IPA4D2P6 1211 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 AGFG2O95081 481 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 HADHAP40939 763 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 BOP1Q14137 746 aaKnown RBP15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 INPP5JQ15735 1006 aaPredicted RBP15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 KCTD19Q17RG1 926 aaPredicted RBP15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 SKOR2Q2VWA4 1001 aaPredicted RBP15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 C4orf17Q53FE4 359 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 KCTD11Q693B1 232 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 UNC5AQ6ZN44 842 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 ARHGEF18Q6ZSZ5 1173 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 CCDC170Q8IYT3 715 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 RBMXL3Q8N7X1 1067 aaKnown RBP15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 Q8NA96 180 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 OR8K5Q8NH50 307 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 TFB2MQ9H5Q4 396 aaKnown RBP15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 LATS2Q9NRM7 1088 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 NLE1Q9NVX2 485 aaPredicted RBP15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 DHCR7Q9UBM7 475 aaKnown RBP15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 SERTAD3Q9UJW9 196 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 MAP4K5Q9Y4K4 846 aa15.38■□□□□ 0.05
ERGIC3-217ENST00000488935 C17orf113A0A1B0GUU1 675 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 C2orf74A8MZ97 194 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 E7EQ34 232 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 OR1I1O60431 355 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 CNOT3O75175 753 aaKnown RBP15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 SORBS2O94875 1100 aaKnown RBP15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 FTCDO95954 541 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 RAB40ALP0C0E4 278 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 UGT2B7P16662 529 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 VAV2P52735 878 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 NCF4Q15080 339 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 ZNF385CQ66K41 422 aaPredicted RBP15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 JMJD6Q6NYC1 403 aaPredicted RBP15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 SPESP1Q6UW49 350 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 ELMO1Q92556 727 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 LRFN5Q96NI6 719 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 OR2A14Q96R47 310 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 FERMT1Q9BQL6 677 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 TMEM121Q9BTD3 319 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 PITPNM3Q9BZ71 974 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 ARNT2Q9HBZ2 717 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 SLC2A6Q9UGQ3 507 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 CDYLQ9Y232 598 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 ASF1AQ9Y294 204 aa15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 PCDHGA9Q9Y5G4 932 aaKnown RBP15.37■□□□□ 0.05
ERGIC3-217ENST00000488935 CACNA1DQ01668 2161 aa15.36■□□□□ 0.05
ERGIC3-217ENST00000488935 CCDC162PA2VCL2 907 aa15.36■□□□□ 0.05
ERGIC3-217ENST00000488935 TCP11X1B4DZS4 312 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms