RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 NUF2Q9BZD4 464 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 PTBP2Q9UKA9 531 aaKnown RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 FZD4Q9ULV1 537 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 TRIM33Q9UPN9 1127 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 STK38LQ9Y2H1 464 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 TRAF6Q9Y4K3 522 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 TRPM6Q9BX84 2022 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 MED19A0JLT2 244 aaPredicted RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 TMEM233B4DJY2 109 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 E2F3O00716 465 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 DNAJC8O75937 253 aaPredicted RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 AGTR2P50052 363 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 INHBCP55103 352 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 NCALDP61601 193 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 SH3BP2P78314 561 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 PDCD2Q16342 344 aaPredicted RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 PHKG1Q16816 387 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 SYTL3Q4VX76 610 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 PMS2CLQ68D20 193 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 PNCKQ6P2M8 343 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 TTC23LQ6PF05 361 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 TMEM220Q6QAJ8 160 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 USP30Q70CQ3 517 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 ARMCX6Q7L4S7 300 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 ADGRG6Q86SQ4 1221 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 RASGRP3Q8IV61 690 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 TMEFF1Q8IYR6 380 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 CLYBLQ8N0X4 340 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 OR56A4Q8NGH8 313 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 GANCQ8TET4 914 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 AGAP11Q8TF27 550 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 ASB11Q8WXH4 323 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 TMEM159Q96B96 161 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 MAELQ96JY0 434 aaKnown RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 LINC00615Q96LM1 132 aaPredicted RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 NSUN5Q96P11 429 aaKnown RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 SLC12A9Q9BXP2 914 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 PREBQ9HCU5 417 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 POLMQ9NP87 494 aaPredicted RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 MID1IP1Q9NPA3 183 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 TMEM74BQ9NUR3 256 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 EIF2B4Q9UI10 523 aaKnown RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 GPR34Q9UPC5 381 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 PI4KAP42356 2102 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 ANKRD12Q6UB98 2062 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 KNL1Q8NG31 2342 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 NUMA1Q14980 2115 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 SLC5A10A0PJK1 596 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 PABPN1LA6NDY0 278 aaKnown RBP12.43□□□□□ -0.42
NELFE-209ENST00000488426 CAPN14A8MX76 684 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 GFYI3L273 518 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 NDUFV2P19404 249 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 MPLP40238 635 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 RASSF2P50749 326 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 PKNOX1P55347 436 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 WSCD2Q2TBF2 565 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 NEK5Q6P3R8 708 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 UBE2R2Q712K3 238 aaPredicted RBP12.43□□□□□ -0.42
NELFE-209ENST00000488426 EGFL6Q8IUX8 553 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 TCAIMQ8N3R3 496 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 BEND7Q8N7W2 519 aaPredicted RBP12.43□□□□□ -0.42
NELFE-209ENST00000488426 TRPC4APQ8TEL6 797 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 DLG3Q92796 817 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 RHBDF1Q96CC6 855 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 SIPA1Q96FS4 1042 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 ZNF382Q96SR6 550 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 EGFL8Q99944 293 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 HGH1Q9BTY7 390 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 CCDC106Q9BWC9 280 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 C1QTNF7Q9BXJ2 289 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 C1QTNF2Q9BXJ5 285 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 OR2AG1Q9H205 316 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 MEAF6Q9HAF1 191 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 PARVBQ9HBI1 364 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 TNFRSF12AQ9NP84 129 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 ATXN10Q9UBB4 475 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 NCKAP1Q9Y2A7 1128 aa12.43□□□□□ -0.42
NELFE-209ENST00000488426 C17orf113A0A1B0GUU1 675 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 GIPC1O14908 333 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 LIN7AO14910 233 aaPredicted RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 AZIN1O14977 448 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 ESRRBO95718 433 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 ANXA5P08758 320 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 ZNF806P0C7X5 589 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 T-ENOLP0DO92 83 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 TSPAN8P19075 237 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 CYP2A7P20853 494 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 ADPRHP54922 357 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 AP1S2P56377 157 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 PLOD1Q02809 727 aaPredicted RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 BTKQ06187 659 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 CDC16Q13042 620 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 PUM1Q14671 1186 aaKnown RBP eCLIP12.42□□□□□ -0.42
NELFE-209ENST00000488426 ZNF658BQ4V348 819 aaPredicted RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 TMEM259Q4ZIN3 620 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 KANK2Q63ZY3 851 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 EFL1Q7Z2Z2 1120 aaKnown RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 TRIM74Q86UV6 250 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 HEATR4Q86WZ0 1026 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms