RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 KLC4Q9NSK0 619 aa6.36□□□□□ -1.39
SOX2-OT-210ENST00000487240 TNFRSF10DQ9UBN6 386 aa6.36□□□□□ -1.39
SOX2-OT-210ENST00000487240 TRIM10Q9UDY6 481 aa6.36□□□□□ -1.39
SOX2-OT-210ENST00000487240 FAM153AQ9UHL3 310 aa6.36□□□□□ -1.39
SOX2-OT-210ENST00000487240 RSPH14Q9UHP6 348 aa6.36□□□□□ -1.39
SOX2-OT-210ENST00000487240 DNAJC16Q9Y2G8 782 aa6.36□□□□□ -1.39
SOX2-OT-210ENST00000487240 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.36□□□□□ -1.39
SOX2-OT-210ENST00000487240 TRAF6Q9Y4K3 522 aa6.36□□□□□ -1.39
SOX2-OT-210ENST00000487240 PCDHGA7Q9Y5G6 932 aa6.36□□□□□ -1.39
SOX2-OT-210ENST00000487240 NPFFR2Q9Y5X5 522 aa6.36□□□□□ -1.39
SOX2-OT-210ENST00000487240 EPN1Q9Y6I3 576 aaPredicted RBP6.36□□□□□ -1.39
SOX2-OT-210ENST00000487240 DUSP10Q9Y6W6 482 aa6.36□□□□□ -1.39
SOX2-OT-210ENST00000487240 ZFC3H1O60293 1989 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 PDZK1P1A8MUH7 402 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 APOC4-APOC2K7ER74 178 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 AQP7O14520 342 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 NVLO15381 856 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 GPR39O43194 453 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 MTSS1O43312 755 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 DUX1O43812 170 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 NUAK1O60285 661 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 WNT11O96014 354 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 APOC2P02655 101 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 ZGLP1P0C6A0 271 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 LIPCP11150 499 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 CTNNA2P26232 953 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 RBL1P28749 1068 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 CSTF2P33240 577 aaKnown RBP eCLIP6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 CTNNA1P35221 906 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 LIMK2P53671 638 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 DCDC1P59894 354 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 OTUD4Q01804 1114 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 CFHR1Q03591 330 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 OLIG2Q13516 323 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 SLC14A2Q15849 920 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 ATP13A5Q4VNC0 1218 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 KHDC1Q4VXA5 237 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 AADACL2Q6P093 401 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 IYDQ6PHW0 289 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 PCSK4Q6UW60 755 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 FAM151BQ6UXP7 276 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 RAD9BQ6WBX8 426 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 BBS12Q6ZW61 710 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 GLT6D1Q7Z4J2 308 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 KIAA1328Q86T90 577 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 SLC9B2Q86UD5 537 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 LRRTM4Q86VH4 590 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 FAM129CQ86XR2 697 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 TRAPPC5Q8IUR0 188 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 TMTC1Q8IUR5 882 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 TRIM48Q8IWZ4 208 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 RAVER1Q8IY67 606 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 AGBL5Q8NDL9 886 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 TMEM52Q8NDY8 209 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 OR4D9Q8NGE8 314 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 OR10G6Q8NH81 332 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 NCSTNQ92542 709 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 ART4Q93070 314 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 TMEM159Q96B96 161 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 RNF31Q96EP0 1072 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 MFSD3Q96ES6 412 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 FCRL5Q96RD9 977 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 CCNL2Q96S94 520 aaPredicted RBP6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 ZFYVE21Q9BQ24 234 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 APOL2Q9BQE5 337 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 FICDQ9BVA6 458 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 TBC1D10AQ9BXI6 508 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 FSD1LQ9BXM9 530 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 CARD9Q9H257 536 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 RMI1Q9H9A7 625 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 TRIM39Q9HCM9 518 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 PRDM7Q9NQW5 492 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 OCIAD1Q9NX40 245 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 SLC23A2Q9UGH3 650 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 REXO2Q9Y3B8 237 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 ATMQ13315 3056 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 SCN8AQ9UQD0 1980 aa6.35□□□□□ -1.39
SOX2-OT-210ENST00000487240 GLYATL1P3A0A0U1RQE8 302 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 LOC285095A0A1B0GVY8 99 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 A6NCN8 305 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 EFCAB7A8K855 629 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 HACD1B0YJ81 288 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 K7ENP7 123 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 HGSO14964 777 aaPredicted RBP6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 KMOO15229 486 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 KCNN4O15554 427 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 PJA2O43164 708 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 VEGFDO43915 354 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 UGT1A9O60656 530 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 C1QL1O75973 258 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 CDK14O94921 469 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 AGTP01019 485 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 PTMAP06454 111 aaKnown RBP6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 THRAP10827 490 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 FGF3P11487 239 aaPredicted RBP6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 F3P13726 295 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 SLC2A4P14672 509 aa6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 ZNF7P17097 686 aaPredicted RBP6.34□□□□□ -1.39
SOX2-OT-210ENST00000487240 TYRP1P17643 537 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms