RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 TAS2R40P59535 323 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 MRPS21P82921 87 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 CCZ1BP86790 482 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 CCZ1P86791 482 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 SLC25A11Q02978 314 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 EIF2B5Q13144 721 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 MTA1Q13330 715 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 ZNF177Q13360 481 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 TUBA3CQ13748 450 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 PTK2BQ14289 1009 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 SPA17Q15506 151 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 FUT11Q495W5 492 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 FBXO43Q4G163 708 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 C4orf46Q504U0 113 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 BOLA3Q53S33 107 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 RABGAP1LQ5R372 815 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 TUBA3EQ6PEY2 450 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 TSSK4Q6SA08 328 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 LRRC31Q6UY01 552 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 CHST9Q7L1S5 443 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 TFAP2DQ7Z6R9 452 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 MFN1Q8IWA4 741 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 CACNA2D3Q8IZS8 1091 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 SPEM1Q8N4L4 309 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 ALLCQ8N6M5 410 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 TOR1AIP2Q8NFQ8 470 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 FAM71BQ8TC56 605 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 ASB10Q8WXI3 467 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 RFFLQ8WZ73 363 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 EXOC4Q96A65 974 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 FUBP1Q96AE4 644 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 ERLEC1Q96DZ1 483 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 ZNF830Q96NB3 372 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 PRPF18Q99633 342 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 FEM1AQ9BSK4 669 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 DESI2Q9BSY9 194 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 SNRNP25Q9BV90 132 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 MYLK2Q9H1R3 596 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 GOLPH3Q9H4A6 298 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 DHX35Q9H5Z1 703 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 ZWILCHQ9H900 591 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 CASS4Q9NQ75 786 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 CWC15Q9P013 229 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 THAP10Q9P2Z0 257 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 GRHPRQ9UBQ7 328 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 SLCO3A1Q9UIG8 710 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 HYOU1Q9Y4L1 999 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 ALG6Q9Y672 507 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 MYO18AQ92614 2054 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 NBPF19A0A087WUL8 3843 aa6.25□□□□□ -1.41
RTFDC1-209ENST00000487211 A0A1W2PQF6 199 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 TMEM110-MUSTN1A8MSY1 372 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 SYT5O00445 386 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 TRIM38O00635 465 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 TIMM44O43615 452 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 BUB1O43683 1085 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 CCNT2O60583 730 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 TNFRSF6BO95407 300 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 KLF8O95600 359 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 CD160O95971 181 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 CD48P09326 243 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 TDGF1P13385 188 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 GOT1P17174 413 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 MST1P26927 711 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 EPHB2P29323 1055 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 OR1E1P30953 314 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 NTSR1P30989 418 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 UQCRC1P31930 480 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 SERPINF1P36955 418 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 ACVRL1P37023 503 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 ARHGAP25P42331 645 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 SSR1P43307 286 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 MAGEA9P43362 315 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 CXCL12P48061 93 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 ARSEP51690 589 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 AIF1P55008 147 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 CSTF1Q05048 431 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 NSUN2Q08J23 767 aaKnown RBP eCLIP6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 DMWDQ09019 674 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 GPS1Q13098 491 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 CDH18Q13634 790 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 ENPP2Q13822 863 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 ZNF234Q14588 700 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 ANGPT1Q15389 498 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 SMTNL2Q2TAL5 461 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 RWDD4Q6NW29 188 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 SYT13Q7L8C5 426 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 ANKS1BQ7Z6G8 1248 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 SETD3Q86TU7 594 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 PSTKQ8IV42 348 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 IZUMO1Q8IYV9 350 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 PROKR1Q8TCW9 393 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 RAPGEF5Q92565 580 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 HSPH1Q92598 858 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 TRIM63Q969Q1 353 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 PDLIM2Q96JY6 352 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 HIST1H2AAQ96QV6 131 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 PSMB7Q99436 277 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 CIPCQ9C0C6 399 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 ZYG11BQ9C0D3 744 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms