RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 GPR18Q14330 331 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 CLPPQ16740 277 aaPredicted RBP18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 TMEM207Q6UWW9 146 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 TAOK1Q7L7X3 1001 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 SPRED1Q7Z699 444 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 CCDC91Q7Z6B0 441 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 NKAPQ8N5F7 415 aaKnown RBP18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 PHC3Q8NDX5 983 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 MYRIPQ8NFW9 859 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 EEF1AKMT1Q8WVE0 214 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 ANKRD7Q92527 254 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 EPB41L1Q9H4G0 881 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 CAB39LQ9H9S4 337 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 GPAMQ9HCL2 828 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 CEP250Q9BV73 2442 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 ASXL3Q9C0F0 2248 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 IGHV1OR21-1A0A087WYE8 117 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 GFYI3L273 518 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 TCEA3O75764 348 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 C1orf105O95561 183 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 TSPAN12O95859 305 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 CRABP2P29373 138 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 CCNFP41002 786 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 ID4P47928 161 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 PGGT1BP53609 377 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 RASA2Q15283 850 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 MROH9Q5TGP6 573 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 TDRPQ86YL5 185 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 DCUN1D3Q8IWE4 304 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 FBXO15Q8NCQ5 510 aaPredicted RBP18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 OR5AR1Q8NGP9 310 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 CFAP61Q8NHU2 1237 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 MAGEC3Q8TD91 643 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 SKA2Q8WVK7 121 aaPredicted RBP18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 ASB11Q8WXH4 323 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 ISL2Q96A47 359 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 TBC1D10AQ9BXI6 508 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 LRRN3Q9H3W5 708 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 TFB2MQ9H5Q4 396 aaKnown RBP18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 KCNK4Q9NYG8 393 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 NFS1Q9Y697 457 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 RP1P56715 2156 aa18.86■□□□□ 0.61
PCOLCE-208ENST00000487172 NTN3O00634 580 aaPredicted RBP18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 OPA1O60313 960 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 KDM1AO60341 852 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 KRT37O76014 449 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 SHBGP04278 402 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 SNRPAP09012 282 aaKnown RBP18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 ALDH4A1P30038 563 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 OR1D5P58170 312 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 BMPR2Q13873 1038 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 ZNF460Q14592 562 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 TTC23LQ6PF05 361 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 PIWIL4Q7Z3Z4 852 aaKnown RBP18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 ZNF761Q86XN6 746 aaPredicted RBP18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 SPNS2Q8IVW8 549 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 MYO1HQ8N1T3 1032 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 OR52E1Q8NGJ3 308 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 HNRNPLLQ8WVV9 542 aaKnown RBP18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 RAD51AP1Q96B01 352 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 LINGO1Q96FE5 620 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 UBXN10Q96LJ8 280 aa18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 PSMC3IPQ9P2W1 217 aaPredicted RBP18.85■□□□□ 0.61
PCOLCE-208ENST00000487172 IQANK1A0A1B0GTG1 560 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 A0A1W2PQM1 296 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 FAM221BA6H8Z2 402 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 SLC16A5O15375 505 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 PHGDHO43175 533 aaKnown RBP18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 CATP04040 527 aaKnown RBP18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 C8GP07360 202 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 SLC26A3P40879 764 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 MAGEA12P43365 314 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 CCL7P80098 99 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 PRKG2Q13237 762 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 GRB7Q14451 532 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 TIFABQ6ZNK6 161 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 Q8N9G6 341 aaPredicted RBP18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 OR10G6Q8NH81 332 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 ADAMTS14Q8WXS8 1223 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 MTBPQ96DY7 904 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 ABCG4Q9H172 646 aa18.84■□□□□ 0.61
PCOLCE-208ENST00000487172 WDR87Q6ZQQ6 2873 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 ZBTB14O43829 449 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 UBXN7O94888 489 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 ALDOAP04075 364 aaKnown RBP18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 RPLP0P05388 317 aaKnown RBP18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 C2P06681 752 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 TPBGLP0DKB5 382 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 CD1CP29017 333 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 TYK2P29597 1187 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 SERPINB8P50452 374 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 SP140Q13342 867 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 PLCL1Q15111 1095 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 PPM1JQ5JR12 505 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 KLHL35Q6PF15 583 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 CMC1Q7Z7K0 106 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 CACTIN-AS1Q8N1I8 211 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 ANKRD49Q8WVL7 239 aa18.83■□□□□ 0.6
PCOLCE-208ENST00000487172 DPYSL5Q9BPU6 564 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms