RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 VASH2Q86V25 355 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 FAM71AQ8IYT1 594 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ADGRF2Q8IZF7 708 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ST13P4Q8IZP2 240 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 DAW1Q8N136 415 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 PYROXD2Q8N2H3 581 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ZNF808Q8N4W9 903 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 UBL4BQ8N7F7 174 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 PRELID2Q8N945 189 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 POC5Q8NA72 575 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ATAD1Q8NBU5 361 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 BHLHE23Q8NDY6 225 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CFAP61Q8NHU2 1237 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 NFKBIDQ8NI38 313 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CSGALNACT1Q8TDX6 532 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ZNF483Q8TF39 744 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 STARD8Q92502 1023 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 TRAPPC9Q96Q05 1148 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 TRNT1Q96Q11 434 aaKnown RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ABHD1Q96SE0 405 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 AGPAT1Q99943 283 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ZSWIM1Q9BR11 485 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 C9orf16Q9BUW7 83 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 MOV10L1Q9BXT6 1211 aaKnown RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 SHCBP1LQ9BZQ2 653 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ZNF518BQ9C0D4 1074 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 OR10A2Q9H208 303 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 RAD21L1Q9H4I0 556 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 PLEKHA4Q9H4M7 779 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CHODLQ9H9P2 273 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 SYTL2Q9HCH5 934 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 MAGEE1Q9HCI5 957 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 NGBQ9NPG2 151 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 SMPD3Q9NY59 655 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 PLA2G3Q9NZ20 509 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CPNE7Q9UBL6 633 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 HMGXB4Q9UGU5 601 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 AFF4Q9UHB7 1163 aaKnown RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 KIAA1257Q9ULG3 409 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ERVK-19Q9WJR5 959 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 TNFRSF18Q9Y5U5 241 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ALG6Q9Y672 507 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ZNF646O15015 1829 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ANKRD31Q8N7Z5 1873 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 RPTORQ8N122 1335 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 IGSF9BQ9UPX0 1349 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 RBBP6Q7Z6E9 1792 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 C1orf232A0A0U1RR37 186 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 GOLGA8IPA6NC78 632 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 GOLGA8OA6NCC3 632 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CFAP73A6NFT4 308 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 MFSD2BA6NFX1 497 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 DDTLA6NHG4 134 aaPredicted RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 GLOD5A6NK44 160 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CCT8L1PA6NM43 557 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 ANKRD65E5RJM6 399 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 GOLGA8NF8WBI6 632 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 H3BUI4 141 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC33A1O00400 549 aaPredicted RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 HAT1O14929 419 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CLIC2O15247 247 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC16A6O15403 523 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 PEX1O43933 1283 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 GUCY1B2O75343 617 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 TRIM3O75382 744 aaPredicted RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 TADA2AO75478 443 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 OAS1P00973 400 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CSTAP01040 98 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 PCCBP05166 539 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 URODP06132 367 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 GLAP06280 429 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 LIPFP07098 398 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 ERVK-10P10266 1014 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 THRBP10828 461 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CALB2P22676 271 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SOAT1P35610 550 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 COILP38432 576 aaPredicted RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC1A1P43005 524 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CBX5P45973 191 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CLCNKBP51801 687 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 STAT2P52630 851 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC18A1P54219 525 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 NME5P56597 212 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 MAGOHP61326 146 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SMAD3P84022 425 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 MYL7Q01449 175 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 PMP22Q01453 160 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CAV1Q03135 178 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 HGFACQ04756 655 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SF3A3Q12874 501 aaKnown RBP eCLIP3.97□□□□□ -1.773e-7■□□□□ 9.1
PRPF38B-205ENST00000485810 OVGP1Q12889 678 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 NFYCQ13952 458 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CAMK1Q14012 370 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 ANGPT1Q15389 498 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SIX1Q15475 284 aaPredicted RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 FSCN1Q16658 493 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 UGT8Q16880 541 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 PABPC1LQ4VXU2 614 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 GPAT3Q53EU6 434 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms