RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ASF1AQ9Y294 204 aa15.46■□□□□ 0.07
UPF3A-208ENST00000484246 EIF3FO00303 357 aaPredicted RBP15.45■□□□□ 0.06
UPF3A-208ENST00000484246 CAPN5O15484 640 aaPredicted RBP15.45■□□□□ 0.06
UPF3A-208ENST00000484246 GSTA2P09210 222 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 GABRB3P28472 473 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 CLCN7P51798 805 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 PLTPP55058 493 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 GFERP55789 205 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 MGAT5Q09328 741 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 ILF2Q12905 390 aaKnown RBP15.45■□□□□ 0.06
UPF3A-208ENST00000484246 KRT33BQ14525 404 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 BRD3Q15059 726 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 ST3GAL2Q16842 350 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 TTLL9Q3SXZ7 439 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 NAPRTQ6XQN6 538 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 NEK10Q6ZWH5 1172 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 ANKMY2Q8IV38 441 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 DCUN1D3Q8IWE4 304 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 ZBED8Q8IZ13 594 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 ZBTB2Q8N680 514 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 BMPERQ8N8U9 685 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 OR52E1Q8NGJ3 308 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 FERD3LQ96RJ6 166 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 HGH1Q9BTY7 390 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 ZMYND15Q9H091 742 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 CCDC68Q9H2F9 335 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 ZNF768Q9H5H4 540 aaKnown RBP15.45■□□□□ 0.06
UPF3A-208ENST00000484246 PCDHGA3Q9Y5H0 932 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 AK5Q9Y6K8 562 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 KNTC1P50748 2209 aa15.45■□□□□ 0.06
UPF3A-208ENST00000484246 CHD8Q9HCK8 2581 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 PMS2P1A4D2B8 440 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 KDM1AO60341 852 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 HAUS5O94927 633 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 JMJD7P0C870 316 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 ENO3P13929 434 aaPredicted RBP15.44■□□□□ 0.06
UPF3A-208ENST00000484246 RBMS1P29558 406 aaKnown RBP15.44■□□□□ 0.06
UPF3A-208ENST00000484246 CSTF2P33240 577 aaKnown RBP eCLIP15.44■□□□□ 0.06
UPF3A-208ENST00000484246 SHMT2P34897 504 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 TRADDQ15628 312 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 HP1BP3Q5SSJ5 553 aaPredicted RBP15.44■□□□□ 0.06
UPF3A-208ENST00000484246 CNSTQ6PJW8 725 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 SLC26A11Q86WA9 606 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 KMT5CQ86Y97 462 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 RASGRP3Q8IV61 690 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 RCBTB1Q8NDN9 531 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 OR5AR1Q8NGP9 310 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 GIMAP7Q8NHV1 300 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 PYROXD1Q8WU10 500 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 LCN9Q8WX39 176 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 KLHL6Q8WZ60 621 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 UBXN4Q92575 508 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 MENTQ9BUN1 341 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 SAYSD1Q9NPB0 183 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 FAM114A2Q9NRY5 505 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 SIDT1Q9NXL6 827 aaKnown RBP15.44■□□□□ 0.06
UPF3A-208ENST00000484246 NSMCE4AQ9NXX6 385 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 OR6C2Q9NZP2 312 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 POMT2Q9UKY4 750 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 ICKQ9UPZ9 632 aa15.44■□□□□ 0.06
UPF3A-208ENST00000484246 TLCD2A6NGC4 264 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 E5RI56 91 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 TAF4O00268 1085 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 NVLO15381 856 aaKnown RBP15.43■□□□□ 0.06
UPF3A-208ENST00000484246 TNFSF15O95150 251 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 MATN4O95460 622 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 C1QAP02745 245 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 AHSGP02765 367 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 CBSLP0DN79 551 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 CHRM3P20309 590 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 CBSP35520 551 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 CARSP49589 748 aaKnown RBP15.43■□□□□ 0.06
UPF3A-208ENST00000484246 SLC7A5Q01650 507 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 KYNUQ16719 465 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 CEP128Q6ZU80 1094 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 AMIGO1Q86WK6 493 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 RELL1Q8IUW5 271 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 PHC3Q8NDX5 983 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 CD200R1Q8TD46 325 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 JPH3Q8WXH2 748 aaPredicted RBP15.43■□□□□ 0.06
UPF3A-208ENST00000484246 FGF11Q92914 225 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 SLC41A2Q96JW4 573 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 TGM7Q96PF1 710 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 MCMBPQ9BTE3 642 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 DDA1Q9BW61 102 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 SRMSQ9H3Y6 488 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 L2HGDHQ9H9P8 463 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 HRASLS2Q9NWW9 162 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 PISDQ9UG56 409 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 DHRS7Q9Y394 339 aa15.43■□□□□ 0.06
UPF3A-208ENST00000484246 AKAP13Q12802 2813 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 ESYT3A0FGR9 886 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 OR6C74A6NCV1 312 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 VPS26AO75436 327 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 SPAG6O75602 509 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 TPBGLP0DKB5 382 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 FGF3P11487 239 aaPredicted RBP15.42■□□□□ 0.06
UPF3A-208ENST00000484246 HGFP14210 728 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 MPSTP25325 297 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 PKLRP30613 574 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms