RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 Q0VFX4 171 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 PDK2Q15119 407 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 PRKD1Q15139 912 aaPredicted RBP10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 TLR1Q15399 786 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 HADHQ16836 314 aaKnown RBP10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 LONRF2Q1L5Z9 754 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 SIRPB2Q5JXA9 342 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 CCDC70Q6NSX1 233 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 LINC00696Q6ZRV3 163 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 CFAP206Q8IYR0 622 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 ADGRF3Q8IZF5 1079 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 ZNF655Q8N720 491 aaPredicted RBP10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 BCORP1Q8N888 145 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 PHC3Q8NDX5 983 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 OR52E1Q8NGJ3 308 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 PROKR1Q8TCW9 393 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 FERD3LQ96RJ6 166 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 MESP1Q9BRJ9 268 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 AP1M1Q9BXS5 423 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 GLOD4Q9HC38 313 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 CHST11Q9NPF2 352 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 SMOXQ9NWM0 555 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 AP1M2Q9Y6Q5 423 aa10.49□□□□□ -0.73
SMARCC1-205ENST00000483847 MAP1AP78559 2803 aaPredicted RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 TRGV8A0A0C4DH27 118 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 C19orf84I3L1E1 186 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 CCL21O00585 134 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 PRICKLE3O43900 615 aaPredicted RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 CYP1A2P05177 515 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 MMP11P24347 488 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 MYL5Q02045 173 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 PRKG2Q13237 762 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 SLC14A2Q15849 920 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 VWA2Q5GFL6 755 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 FCRL6Q6DN72 434 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 KDELC1Q6UW63 502 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 KIRREL2Q6UWL6 708 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 NPNTQ6UXI9 565 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 GFRALQ6UXV0 394 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 ZNF808Q8N4W9 903 aaPredicted RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 SLC25A41Q8N5S1 370 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 C19orf47Q8N9M1 422 aaKnown RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 OR1N1Q8NGS0 311 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 ZNF398Q8TD17 642 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 COG1Q8WTW3 980 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 RAPGEF5Q92565 580 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 N4BP2L2Q92802 583 aaPredicted RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 RBM41Q96IZ5 413 aaKnown RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 THOC3Q96J01 351 aaKnown RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 MAGEB10Q96LZ2 347 aaPredicted RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 ZNF830Q96NB3 372 aaPredicted RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 RNF157Q96PX1 679 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 SRPK1Q96SB4 655 aaKnown RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 TRIM56Q9BRZ2 755 aaKnown RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 TFB2MQ9H5Q4 396 aaKnown RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 EPS8L2Q9H6S3 715 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 ACTR10Q9NZ32 417 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 SH3BGRL2Q9UJC5 107 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 CDC23Q9UJX2 597 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 HS3ST3B1Q9Y662 390 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 FBN3Q75N90 2809 aa10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 ANKHD1Q8IWZ3 2542 aaKnown RBP10.48□□□□□ -0.73
SMARCC1-205ENST00000483847 LOC285095A0A1B0GVY8 99 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 C2orf74A8MZ97 194 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 MYO1FO00160 1098 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 ZSCAN9O15535 394 aaPredicted RBP10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 SNRNP200O75643 2136 aaKnown RBP10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 CD63P08962 238 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 UGT2B7P16662 529 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 WNT3AP56704 352 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 ITGA9Q13797 1035 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 CDSNQ15517 529 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 BCL7AQ4VC05 210 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 IRAK1BP1Q5VVH5 260 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 ZDHHC20Q5W0Z9 365 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 RPUSD3Q6P087 351 aaKnown RBP10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 SPESP1Q6UW49 350 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 ISLR2Q6UXK2 745 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 SHISA6Q6ZSJ9 500 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 CDH24Q86UP0 819 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 AMIGO1Q86WK6 493 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 MAP7D3Q8IWC1 876 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 FLVCR1-AS1Q8TAF5 88 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 BLOC1S5Q8TDH9 187 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 NR4A3Q92570 626 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 LINC00615Q96LM1 132 aaPredicted RBP10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 OLFM3Q96PB7 478 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 HGH1Q9BTY7 390 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 LHPPQ9H008 270 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 OR52A5Q9H2C5 316 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 TRABDQ9H4I3 376 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 TXLNGQ9NUQ3 528 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 SUCOQ9UBS9 1254 aaKnown RBP10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 ICKQ9UPZ9 632 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 HEBP2Q9Y5Z4 205 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 SPG11Q96JI7 2443 aa10.47□□□□□ -0.73
SMARCC1-205ENST00000483847 A0A0A6YYK5 440 aaPredicted RBP10.46□□□□□ -0.73
SMARCC1-205ENST00000483847 WISP2O76076 250 aa10.46□□□□□ -0.73
SMARCC1-205ENST00000483847 PROSCO94903 275 aa10.46□□□□□ -0.73
SMARCC1-205ENST00000483847 UNC5CO95185 931 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms