RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 RAB40ALP0C0E4 278 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 CCDC175P0C221 793 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 TSPY3P0CV98 308 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 TSPY8P0CW00 308 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 TGFB3P10600 412 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 CETPP11597 493 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 PCGF2P35227 344 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 MTHFRP42898 656 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 CCR10P46092 362 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 SLC9A3P48764 834 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 LIMK1P53667 647 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 TSPY1Q01534 308 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 RBPJQ06330 500 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 ACSM1Q08AH1 577 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 ZRSR1Q15695 479 aaKnown RBP5.32□□□□□ -1.56
SF3B1-210ENST00000482158 HYAL4Q2M3T9 481 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 SUSD1Q6UWL2 747 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 MAML2Q8IZL2 1156 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-210ENST00000482158 ARHGAP24Q8N264 748 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 TRIML1Q8N9V2 468 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 OR13J1Q8NGT2 312 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 ZNF473Q8WTR7 871 aaKnown RBP5.32□□□□□ -1.56
SF3B1-210ENST00000482158 SGK494Q96LW2 274 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 TRMT61BQ9BVS5 477 aaKnown RBP5.32□□□□□ -1.56
SF3B1-210ENST00000482158 TCF7L2Q9NQB0 619 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 DPP3Q9NY33 737 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 B3GAT1Q9P2W7 334 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 MTUS1Q9ULD2 1270 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 RNF150Q9ULK6 438 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 ABT1Q9ULW3 272 aaKnown RBP5.32□□□□□ -1.56
SF3B1-210ENST00000482158 LRP12Q9Y561 859 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 KRTAP29-1A8MX34 341 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-210ENST00000482158 MEIS2O14770 477 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 RECQL5O94762 991 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-210ENST00000482158 HSPA4LO95757 839 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 GLULP15104 373 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 DCTP40126 519 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 ZNF75DP51815 510 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 RPL36AP83881 106 aaKnown RBP5.31□□□□□ -1.56
SF3B1-210ENST00000482158 MAT1AQ00266 395 aaKnown RBP5.31□□□□□ -1.56
SF3B1-210ENST00000482158 RUSC1-AS1Q66K80 236 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 PLA2G4FQ68DD2 849 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 PRR27Q6MZM9 219 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 IL27RAQ6UWB1 636 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 KRT77Q7Z794 578 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 COMMD2Q86X83 199 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 SLC4A11Q8NBS3 891 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 ATL1Q8WXF7 558 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 ST6GAL2Q96JF0 529 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 SFXN2Q96NB2 322 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 MUS81Q96NY9 551 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 SLC25A23Q9BV35 468 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 TAAR2Q9P1P5 351 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 FAF1Q9UNN5 650 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-210ENST00000482158 LIPGQ9Y5X9 500 aa5.31□□□□□ -1.56
SF3B1-210ENST00000482158 PCDH11YQ9BZA8 1340 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 EIF5BO60841 1220 aaKnown RBP5.3□□□□□ -1.56
SF3B1-210ENST00000482158 KRT36O76013 467 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 QDPRP09417 244 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 PTAFRP25105 342 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 PTPN3P26045 913 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 POLR2LP62875 67 aaKnown RBP5.3□□□□□ -1.56
SF3B1-210ENST00000482158 POU3F1Q03052 451 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-210ENST00000482158 PRKCZQ05513 592 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 PPIGQ13427 754 aaKnown RBP eCLIP5.3□□□□□ -1.561e-14■■□□□ 13.5
SF3B1-210ENST00000482158 SYT14P1Q58G82 188 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 SPECC1Q5M775 1068 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 ZBTB49Q6ZSB9 765 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 PLD3Q8IV08 490 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 METTL27Q8N6F8 245 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-210ENST00000482158 CAMKVQ8NCB2 501 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 DMBX1Q8NFW5 382 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 OR2T12Q8NG77 320 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 LMLNQ96KR4 655 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 SEPHS2Q99611 448 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 TFB2MQ9H5Q4 396 aaKnown RBP5.3□□□□□ -1.56
SF3B1-210ENST00000482158 OLFML3Q9NRN5 406 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 SERINC1Q9NRX5 453 aa5.3□□□□□ -1.56
SF3B1-210ENST00000482158 NEMP2A6NFY4 417 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 BMPR1BO00238 502 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 GAPDHSO14556 408 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-210ENST00000482158 IGHV2-70P01814 119 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 ATP5BP06576 529 aaKnown RBP5.29□□□□□ -1.56
SF3B1-210ENST00000482158 SMIM18P0DKX4 95 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 DVL1P1P54792 670 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-210ENST00000482158 B3GALT5-AS1P59052 145 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 CX3CL1P78423 397 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 DMPKQ09013 629 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 ZNF273Q14593 569 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 PSMD6Q15008 389 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 TNIP1Q15025 636 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 ASPRV1Q53RT3 343 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 CORO6Q6QEF8 472 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 VSIG1Q86XK7 387 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 FOXP4Q8IVH2 680 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-210ENST00000482158 NKAIN3Q8N8D7 197 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 NPEPL1Q8NDH3 523 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 KLHDC9Q8NEP7 349 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 KIF18AQ8NI77 898 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 GRHL3Q8TE85 626 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms