RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 NPNTQ6UXI9 565 aa16.76■□□□□ 0.27
RXRB-203ENST00000481441 CFAP206Q8IYR0 622 aa16.76■□□□□ 0.27
RXRB-203ENST00000481441 PROKR1Q8TCW9 393 aa16.76■□□□□ 0.27
RXRB-203ENST00000481441 ZNF398Q8TD17 642 aa16.76■□□□□ 0.27
RXRB-203ENST00000481441 RELTQ969Z4 430 aa16.76■□□□□ 0.27
RXRB-203ENST00000481441 LURAP1Q96LR2 239 aa16.76■□□□□ 0.27
RXRB-203ENST00000481441 TEKT5Q96M29 485 aa16.76■□□□□ 0.27
RXRB-203ENST00000481441 AP1M1Q9BXS5 423 aa16.76■□□□□ 0.27
RXRB-203ENST00000481441 SPRTNQ9H040 489 aaPredicted RBP16.76■□□□□ 0.27
RXRB-203ENST00000481441 TFB2MQ9H5Q4 396 aaKnown RBP16.76■□□□□ 0.27
RXRB-203ENST00000481441 NDOR1Q9UHB4 597 aa16.76■□□□□ 0.27
RXRB-203ENST00000481441 FAM153AQ9UHL3 310 aa16.76■□□□□ 0.27
RXRB-203ENST00000481441 SNRNP200O75643 2136 aaKnown RBP16.75■□□□□ 0.27
RXRB-203ENST00000481441 C3orf70A6NLC5 250 aaPredicted RBP16.75■□□□□ 0.27
RXRB-203ENST00000481441 C2orf74A8MZ97 194 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 PPP1R12AO14974 1030 aaPredicted RBP16.75■□□□□ 0.27
RXRB-203ENST00000481441 ATXN8OSP0DMR3 200 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 PTPN3P26045 913 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 CD68P34810 354 aaPredicted RBP16.75■□□□□ 0.27
RXRB-203ENST00000481441 FANCCQ00597 558 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 CDC16Q13042 620 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 PTPRCAPQ14761 206 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 SLC9A5Q14940 896 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 NKAIN1Q4KMZ8 207 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 ZFYVE27Q5T4F4 411 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 GLT6D1Q7Z4J2 308 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 ADGRF3Q8IZF5 1079 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 SLC25A41Q8N5S1 370 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 OR52E1Q8NGJ3 308 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 HM13Q8TCT9 377 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 BLOC1S5Q8TDH9 187 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 FERD3LQ96RJ6 166 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 SLC6A20Q9NP91 592 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 DHCR7Q9UBM7 475 aaKnown RBP16.75■□□□□ 0.27
RXRB-203ENST00000481441 PKP3Q9Y446 797 aa16.75■□□□□ 0.27
RXRB-203ENST00000481441 KLF2Q9Y5W3 355 aaPredicted RBP16.75■□□□□ 0.27
RXRB-203ENST00000481441 BZW2Q9Y6E2 419 aaKnown RBP16.75■□□□□ 0.27
RXRB-203ENST00000481441 LRRD1A4D1F6 860 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 APOL1O14791 398 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 ALOX12BO75342 701 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 PRAMEF1O95521 474 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 CTSBP07858 339 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 PTGER4P35408 488 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 ZIC1Q15915 447 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 DEFB110Q30KQ9 67 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 AGAP7PQ5VUJ5 663 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 PRAMEF13Q5VWM6 474 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 SARM1Q6SZW1 724 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 GDF7Q7Z4P5 450 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 AMIGO1Q86WK6 493 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 C19orf47Q8N9M1 422 aaKnown RBP16.74■□□□□ 0.27
RXRB-203ENST00000481441 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.74■□□□□ 0.27
RXRB-203ENST00000481441 NACC2Q96BF6 587 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 MRGPRX2Q96LB1 330 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 AGAP4Q96P64 663 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 DEF6Q9H4E7 631 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 SLC22A11Q9NSA0 550 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 ACTR10Q9NZ32 417 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 FBXL4Q9UKA2 621 aa16.74■□□□□ 0.27
RXRB-203ENST00000481441 CCDC78A2IDD5 438 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 JRKO75564 520 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 SERPINC1P01008 464 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 MMP11P24347 488 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 TLR1Q15399 786 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 SLC1A5Q15758 541 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 FIGNQ5HY92 759 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 FCRL6Q6DN72 434 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 ALKBH5Q6P6C2 394 aaKnown RBP16.73■□□□□ 0.27
RXRB-203ENST00000481441 SPESP1Q6UW49 350 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 VSIG1Q86XK7 387 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 ITLN2Q8WWU7 325 aaPredicted RBP16.73■□□□□ 0.27
RXRB-203ENST00000481441 N4BP2L2Q92802 583 aaPredicted RBP16.73■□□□□ 0.27
RXRB-203ENST00000481441 RBM41Q96IZ5 413 aaKnown RBP16.73■□□□□ 0.27
RXRB-203ENST00000481441 CNDP1Q96KN2 507 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 NAP1L5Q96NT1 182 aaPredicted RBP16.73■□□□□ 0.27
RXRB-203ENST00000481441 CHRNA10Q9GZZ6 450 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 OR52A5Q9H2C5 316 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 XKR8Q9H6D3 395 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 CTTNBP2NLQ9P2B4 639 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 NENFQ9UMX5 172 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 MTORP42345 2549 aa16.73■□□□□ 0.27
RXRB-203ENST00000481441 STX7O15400 261 aaKnown RBP16.72■□□□□ 0.27
RXRB-203ENST00000481441 ZSCAN9O15535 394 aaPredicted RBP16.72■□□□□ 0.27
RXRB-203ENST00000481441 NFKB1P19838 968 aa16.72■□□□□ 0.27
RXRB-203ENST00000481441 PRLHRP49683 370 aa16.72■□□□□ 0.27
RXRB-203ENST00000481441 OTUD4Q01804 1114 aaKnown RBP16.72■□□□□ 0.27
RXRB-203ENST00000481441 WASHC5Q12768 1159 aa16.72■□□□□ 0.27
RXRB-203ENST00000481441 PRKD1Q15139 912 aaPredicted RBP16.72■□□□□ 0.27
RXRB-203ENST00000481441 FILIP1LQ4L180 1135 aa16.72■□□□□ 0.27
RXRB-203ENST00000481441 ZNF658BQ4V348 819 aaPredicted RBP16.72■□□□□ 0.27
RXRB-203ENST00000481441 ZNF324BQ6AW86 544 aaPredicted RBP16.72■□□□□ 0.27
RXRB-203ENST00000481441 FAM180AQ6UWF9 173 aa16.72■□□□□ 0.27
RXRB-203ENST00000481441 TRIM73Q86UV7 250 aa16.72■□□□□ 0.27
RXRB-203ENST00000481441 ZNF655Q8N720 491 aaPredicted RBP16.72■□□□□ 0.27
RXRB-203ENST00000481441 PHC3Q8NDX5 983 aa16.72■□□□□ 0.27
RXRB-203ENST00000481441 SYN2Q92777 582 aaPredicted RBP16.72■□□□□ 0.27
RXRB-203ENST00000481441 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.72■□□□□ 0.27
RXRB-203ENST00000481441 OXNAD1Q96HP4 312 aaPredicted RBP16.72■□□□□ 0.27
RXRB-203ENST00000481441 ASB8Q9H765 288 aa16.72■□□□□ 0.27
RXRB-203ENST00000481441 MVB12BQ9H7P6 319 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms