RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 ZKSCAN5Q9Y2L8 839 aa11.77□□□□□ -0.53
SQSTM1-207ENST00000481335 PCDHGB7Q9Y5F8 929 aa11.77□□□□□ -0.53
SQSTM1-207ENST00000481335 PCDHGA9Q9Y5G4 932 aaKnown RBP11.77□□□□□ -0.53
SQSTM1-207ENST00000481335 RP1L1Q8IWN7 2480 aaPredicted RBP11.77□□□□□ -0.53
SQSTM1-207ENST00000481335 MED13Q9UHV7 2174 aa11.77□□□□□ -0.53
SQSTM1-207ENST00000481335 HECTD1Q9ULT8 2610 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 ANKRD12Q6UB98 2062 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 SLC9B1P1A6NJY1 282 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 E7EQ34 232 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 E7EVH7 732 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 MEN1O00255 615 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 BTN3A3O00478 584 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 CCL22O00626 93 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 CD63P08962 238 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 FURINP09958 794 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 TPH1P17752 444 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 CYP2A7P20853 494 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 ADRA1DP25100 572 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 ACADLP28330 430 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 PDHA2P29803 388 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 RORAP35398 523 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 GPS2Q13227 327 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 AARS2Q5JTZ9 985 aaKnown RBP11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 DRICH1Q6PGQ1 229 aaPredicted RBP11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 SPESP1Q6UW49 350 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 HOOK3Q86VS8 718 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 HPS6Q86YV9 775 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 ADGRF3Q8IZF5 1079 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 CLDN19Q8N6F1 224 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 OR52K1Q8NGK4 314 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 OR13J1Q8NGT2 312 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 NAT14Q8WUY8 206 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 ELMO1Q92556 727 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 MR1Q95460 341 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 TCTN2Q96GX1 697 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 TRAPPC9Q96Q05 1148 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 DESI2Q9BSY9 194 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 DHRS4Q9BTZ2 278 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 ZNF71Q9NQZ8 489 aaPredicted RBP11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 EIF2B3Q9NR50 452 aaKnown RBP11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 ACTR10Q9NZ32 417 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 PAK5Q9P286 719 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 ASF1AQ9Y294 204 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 TP53TG5Q9Y2B4 290 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 PADI2Q9Y2J8 665 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 AP1M2Q9Y6Q5 423 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 DOPEY2Q9Y3R5 2298 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 RELNP78509 3460 aa11.76□□□□□ -0.53
SQSTM1-207ENST00000481335 TCRBV7S2A1N4TA0A589 114 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 SLC5A10A0PJK1 596 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 TMEM150CB9EJG8 249 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ARHGAP6O43182 974 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 RPN2P04844 631 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ST6GAL1P15907 406 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ARCN1P48444 511 aaKnown RBP11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 LMAN1P49257 510 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ITGA1P56199 1179 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 PRAMEP78395 509 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 FOXK1P85037 733 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ABRQ12979 859 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 SYTL3Q4VX76 610 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 DNAJC21Q5F1R6 531 aaKnown RBP11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ZNF789Q5FWF6 425 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 PLEKHS1Q5SXH7 462 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 TSTD2Q5T7W7 516 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ARMC3Q5W041 872 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 PAPD7Q5XG87 772 aaKnown RBP11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 PPP1R21Q6ZMI0 780 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ZNF662Q6ZS27 426 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 SLC13A5Q86YT5 568 aaPredicted RBP11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 GPR135Q8IZ08 494 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 MPP5Q8N3R9 675 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 CCDC89Q8N998 374 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 C19orf47Q8N9M1 422 aaKnown RBP11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 TEX19Q8NA77 164 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 MAIP1Q8WWC4 291 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ATG4AQ8WYN0 398 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 CLIP3Q96DZ5 547 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 HGH1Q9BTY7 390 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ACTR5Q9H9F9 607 aaPredicted RBP11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ETNK1Q9HBU6 452 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 CASS4Q9NQ75 786 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 G3BP2Q9UN86 482 aaKnown RBP11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 SNX7Q9UNH6 387 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ICKQ9UPZ9 632 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 ZNF148Q9UQR1 794 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 PCM1Q15154 2024 aa11.75□□□□□ -0.53
SQSTM1-207ENST00000481335 CCDC78A2IDD5 438 aa11.74□□□□□ -0.53
SQSTM1-207ENST00000481335 CCDC162PA2VCL2 907 aa11.74□□□□□ -0.53
SQSTM1-207ENST00000481335 C9J4A7 227 aa11.74□□□□□ -0.53
SQSTM1-207ENST00000481335 PYCARD-AS1I3L0S3 204 aa11.74□□□□□ -0.53
SQSTM1-207ENST00000481335 GOT2P00505 430 aaKnown RBP11.74□□□□□ -0.53
SQSTM1-207ENST00000481335 IFNB1P01574 187 aa11.74□□□□□ -0.53
SQSTM1-207ENST00000481335 PRSS56P0CW18 603 aa11.74□□□□□ -0.53
SQSTM1-207ENST00000481335 AGXTP21549 392 aa11.74□□□□□ -0.53
SQSTM1-207ENST00000481335 TTPAP49638 278 aa11.74□□□□□ -0.53
SQSTM1-207ENST00000481335 IL10RAQ13651 578 aa11.74□□□□□ -0.53
SQSTM1-207ENST00000481335 KIR2DS3Q14952 304 aa11.74□□□□□ -0.53
SQSTM1-207ENST00000481335 SLC5A12Q1EHB4 618 aa11.74□□□□□ -0.53
SQSTM1-207ENST00000481335 FASTKD1Q53R41 847 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms