RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 AHCYL2Q96HN2 611 aaKnown RBP19.21■□□□□ 0.67
LIME1-205ENST00000480139 ELMO2Q96JJ3 720 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 FOPNLQ96NB1 174 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 GPR22Q99680 433 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 OLFM1Q99784 485 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 RAB33BQ9H082 229 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 OGFRQ9NZT2 677 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 RIPK2O43353 540 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 PROS1P07225 676 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 CSF2RBP32927 897 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 CCNFP41002 786 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 RGS4P49798 205 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 PDX1P52945 283 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 VSNL1P62760 191 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 ABRQ12979 859 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 PDAP1Q13442 181 aaKnown RBP19.2■□□□□ 0.66
LIME1-205ENST00000480139 EFTUD2Q15029 972 aaKnown RBP eCLIP19.2■□□□□ 0.663e-6■■■■□ 26.3
LIME1-205ENST00000480139 ERCC6LQ2NKX8 1250 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 AMZ1Q400G9 498 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 MAP9Q49MG5 647 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 NKAIN2Q5VXU1 208 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 CPNE9Q8IYJ1 553 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 OR4D9Q8NGE8 314 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 OR52E1Q8NGJ3 308 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 TMEM74Q96NL1 305 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 HGH1Q9BTY7 390 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 SYNDIG1Q9H7V2 258 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 PDP2Q9P2J9 529 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 EPHA6Q9UF33 1036 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 MN1Q10571 1320 aaPredicted RBP19.2■□□□□ 0.66
LIME1-205ENST00000480139 SPEGQ15772 3267 aa19.2■□□□□ 0.66
LIME1-205ENST00000480139 TMX2-CTNND1H3BSU7 103 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 HYAL3O43820 417 aaPredicted RBP19.19■□□□□ 0.66
LIME1-205ENST00000480139 PSIP1O75475 530 aaKnown RBP19.19■□□□□ 0.66
LIME1-205ENST00000480139 TUBBP07437 444 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 JUPP14923 745 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 AMD1P17707 334 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 CCKBRP32239 447 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 TAS2R39P59534 338 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 CFHR1Q03591 330 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 ISXQ2M1V0 245 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 TMEM71Q6P5X7 295 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 PAQR3Q6TCH7 311 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 PLXDC1Q8IUK5 500 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 RASGRP3Q8IV61 690 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 SLITRK4Q8IW52 837 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 MAGEC3Q8TD91 643 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 SKA2Q8WVK7 121 aaPredicted RBP19.19■□□□□ 0.66
LIME1-205ENST00000480139 SLC44A1Q8WWI5 657 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 LCN9Q8WX39 176 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 TSPAN17Q96FV3 270 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 NUDT22Q9BRQ3 303 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 RDH14Q9HBH5 336 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.19■□□□□ 0.66
LIME1-205ENST00000480139 ATXN7L1Q9ULK2 861 aaPredicted RBP19.19■□□□□ 0.66
LIME1-205ENST00000480139 MTO1Q9Y2Z2 717 aaKnown RBP19.19■□□□□ 0.66
LIME1-205ENST00000480139 NFS1Q9Y697 457 aa19.19■□□□□ 0.66
LIME1-205ENST00000480139 V9GYY5 206 aaPredicted RBP19.19■□□□□ 0.66
LIME1-205ENST00000480139 OR5K3A6NET4 321 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 CSO75390 466 aaKnown RBP19.18■□□□□ 0.66
LIME1-205ENST00000480139 C1orf105O95561 183 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 C9P02748 559 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 ZNF37AP17032 561 aaPredicted RBP19.18■□□□□ 0.66
LIME1-205ENST00000480139 SHMT2P34897 504 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 IL2P60568 153 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 SHC2P98077 582 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 ZFP36L1Q07352 338 aaKnown RBP19.18■□□□□ 0.66
LIME1-205ENST00000480139 TRA2AQ13595 282 aaKnown RBP eCLIP19.18■□□□□ 0.66
LIME1-205ENST00000480139 TTC23LQ6PF05 361 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 CYHR1Q6ZMK1 362 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 USP53Q70EK8 1073 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 TMPRSS9Q7Z410 1059 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 FBXO15Q8NCQ5 510 aaPredicted RBP19.18■□□□□ 0.66
LIME1-205ENST00000480139 CFAP61Q8NHU2 1237 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 EEF1AKMT1Q8WVE0 214 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 ASB11Q8WXH4 323 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 NCSTNQ92542 709 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 RSC1A1Q92681 617 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 RAD51AP1Q96B01 352 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 PDLIM5Q96HC4 596 aaKnown RBP19.18■□□□□ 0.66
LIME1-205ENST00000480139 TWSG1Q9GZX9 223 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 SRMSQ9H3Y6 488 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 SYTL2Q9HCH5 934 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 NEUROG3Q9Y4Z2 214 aa19.18■□□□□ 0.66
LIME1-205ENST00000480139 GFYI3L273 518 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 MATN2O00339 956 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 FAM155BO75949 473 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 TSPAN12O95859 305 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 CATP04040 527 aaKnown RBP19.17■□□□□ 0.66
LIME1-205ENST00000480139 ITGA2BP08514 1039 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 TPBGLP0DKB5 382 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 THRAP10827 490 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 TYRP1P17643 537 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 SLC12A2P55011 1212 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 INHBCP55103 352 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 CLDN6P56747 220 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 PRKG2Q13237 762 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 GRB7Q14451 532 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 ZKSCAN8Q15776 578 aaPredicted RBP19.17■□□□□ 0.66
LIME1-205ENST00000480139 EMBQ6PCB8 327 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms