RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 MYLK3Q32MK0 819 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 KRTAP24-1Q3LI83 254 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 CRY2Q49AN0 593 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 DHRS7BQ6IAN0 325 aaPredicted RBP3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 DUS1LQ6P1R4 473 aaKnown RBP3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 BRAT1Q6PJG6 821 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 TOM1L2Q6ZVM7 507 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 PLPPR4Q7Z2D5 763 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 RASGEF1CQ8N431 466 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 OR2AK2Q8NG84 335 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 LILRB1Q8NHL6 650 aaPredicted RBP3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 ORAI1Q96D31 301 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 ARSGQ96EG1 525 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 ADGRG7Q96K78 797 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 ZMAT2Q96NC0 199 aaKnown RBP3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 PPIL3Q9H2H8 161 aaKnown RBP3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 KCNK15Q9H427 330 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 DNAJC18Q9H819 358 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 ERVMER34-1Q9H9K5 563 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 MCM9Q9NXL9 1143 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 DONSONQ9NYP3 566 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 C5AR2Q9P296 337 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 MALT1Q9UDY8 824 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 AMACRQ9UHK6 382 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 ZHX1Q9UKY1 873 aaPredicted RBP3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 CCL27Q9Y4X3 112 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 MAP3K19Q56UN5 1328 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 NRXN2Q9P2S2 1712 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 A0A1W2PRQ8 180 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 SOCS6O14544 535 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 RFPL2O75678 378 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 APOA4P06727 396 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 IGHV4-30-4P0DP06 118 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 MYBL1P10243 752 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 HSPA5P11021 654 aaKnown RBP3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 SRCP12931 536 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 NR2F2P24468 414 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 BNC1Q01954 994 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 ALCAMQ13740 583 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 OASLQ15646 514 aaKnown RBP3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 ATP13A5Q4VNC0 1218 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 IGSF11Q5DX21 431 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 KRT80Q6KB66 452 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 ATG9AQ7Z3C6 839 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 HAUS6Q7Z4H7 955 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 CCDC190Q86UF4 302 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 ADIPOR2Q86V24 386 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 MUC20Q8N307 709 aaPredicted RBP3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 OR10S1Q8NGN2 331 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 THAP6Q8TBB0 222 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 LPGAT1Q92604 370 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 RND1Q92730 232 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 EPYCQ99645 322 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 GFI1Q99684 422 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 ZCCHC17Q9NP64 241 aaKnown RBP3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 HACL1Q9UJ83 578 aa3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 ASTN2O75129 1339 aaPredicted RBP3.93□□□□□ -1.78
CDC42BPA-212ENST00000478573 CCDC88AQ3V6T2 1871 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 DICER1Q9UPY3 1922 aaKnown RBP3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 IGLV5-52A0A0A0MRZ9 124 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 TRBC2A0A5B9 178 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 HS3ST1O14792 307 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 ANKRD28O15084 1053 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 PSMD10O75832 226 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 KRT36O76013 467 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 CGAP01215 116 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 F7P08709 466 aaPredicted RBP3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 VPREB1P12018 145 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 GAGE2BQ13066 116 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 IL11RAQ14626 422 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 SF3B4Q15427 424 aaKnown RBP eCLIP3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 ZRSR1Q15695 479 aaKnown RBP3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 GAGE2EQ4V326 116 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 C1orf141Q5JVX7 400 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 PAPPA-AS1Q5QFB9 102 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 C18orf63Q68DL7 685 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 FAM109BQ6ICB4 259 aaPredicted RBP3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 GAGE2AQ6NT46 116 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 FAM122CQ6P4D5 195 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 INTS8Q75QN2 995 aaKnown RBP3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 ANKRD23Q86SG2 305 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 LDB1Q86U70 411 aaPredicted RBP3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 CEP57Q86XR8 500 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 CEP97Q8IW35 865 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 GCSAMQ8N6F7 178 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 TSPAN14Q8NG11 270 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 GSDMBQ8TAX9 411 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 DNAAF4Q8WXU2 420 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 ZNF653Q96CK0 615 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 CFAP57Q96MR6 1250 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 SLC22A12Q96S37 553 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 CDRT15Q96T59 188 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 DDOQ99489 341 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 CCDC106Q9BWC9 280 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 EDEM3Q9BZQ6 932 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 IL25Q9H293 177 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 NOX4Q9NPH5 578 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 C1RLQ9NZP8 487 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 BCCIPQ9P287 314 aaKnown RBP eCLIP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms