RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 DCDP81605 110 aaKnown RBP9.34□□□□□ -0.91
CCM2-210ENST00000478169 XIAPP98170 497 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 PTPRCAPQ14761 206 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 MLIPQ5VWP3 458 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 ZNF449Q6P9G9 518 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 SPOCD1Q6ZMY3 1216 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 ZC3H18Q86VM9 953 aaKnown RBP9.34□□□□□ -0.91
CCM2-210ENST00000478169 AMIGO1Q86WK6 493 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 ADGRF3Q8IZF5 1079 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 LILRA3Q8N6C8 439 aaPredicted RBP9.34□□□□□ -0.91
CCM2-210ENST00000478169 OR2Y1Q8NGV0 311 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 NAT14Q8WUY8 206 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 UBE2Q2Q8WVN8 375 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 P3H4Q92791 437 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 N4BP2L2Q92802 583 aaPredicted RBP9.34□□□□□ -0.91
CCM2-210ENST00000478169 NACC2Q96BF6 587 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 PTERQ96BW5 349 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 RBM41Q96IZ5 413 aaKnown RBP9.34□□□□□ -0.91
CCM2-210ENST00000478169 GBP5Q96PP8 586 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 COPS8Q99627 209 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 AP1M1Q9BXS5 423 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 OR52A5Q9H2C5 316 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 DEF6Q9H4E7 631 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 VPS37BQ9H9H4 285 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 ATP13A2Q9NQ11 1180 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 P4HTMQ9NXG6 502 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 ACTR10Q9NZ32 417 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 RSPH14Q9UHP6 348 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 FKBPLQ9UIM3 349 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 CRLS1Q9UJA2 301 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 PTRH2Q9Y3E5 179 aaKnown RBP9.34□□□□□ -0.91
CCM2-210ENST00000478169 PCDHGA10Q9Y5H3 936 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 ARL5AQ9Y689 179 aa9.34□□□□□ -0.91
CCM2-210ENST00000478169 HACD1B0YJ81 288 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 H3BMH7 237 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 AKR1B10O60218 316 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 OR2B3O76000 313 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 ANXA9O76027 345 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 CRTAMO95727 393 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 AGTP01019 485 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 GSTM1P09488 218 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 CBSLP0DN79 551 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 PVRP15151 417 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 PECAM1P16284 738 aaPredicted RBP9.33□□□□□ -0.92
CCM2-210ENST00000478169 CBSP35520 551 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 GLRBP48167 497 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 PER3P56645 1201 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 GSTM4Q03013 218 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 AIMP2Q13155 320 aaKnown RBP9.33□□□□□ -0.92
CCM2-210ENST00000478169 RPA4Q13156 261 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 ZNF658BQ4V348 819 aaPredicted RBP9.33□□□□□ -0.92
CCM2-210ENST00000478169 TLDC1Q6P9B6 456 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 SPESP1Q6UW49 350 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 RANBP10Q6VN20 620 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 SNX20Q7Z614 316 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 CUZD1Q86UP6 607 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 HOOK3Q86VS8 718 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 NXPE1Q8N323 547 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 C19orf47Q8N9M1 422 aaKnown RBP9.33□□□□□ -0.92
CCM2-210ENST00000478169 OR52E1Q8NGJ3 308 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 COG1Q8WTW3 980 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 INPP5DQ92835 1189 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 KLHL25Q9H0H3 589 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 COG4Q9H9E3 785 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 IFT80Q9P2H3 777 aaPredicted RBP9.33□□□□□ -0.92
CCM2-210ENST00000478169 NDOR1Q9UHB4 597 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 SRPK3Q9UPE1 567 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 APCP25054 2843 aa9.33□□□□□ -0.92
CCM2-210ENST00000478169 IGLV3-16A0A075B6K0 115 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 AGPSO00116 658 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 ZSCAN9O15535 394 aaPredicted RBP9.32□□□□□ -0.92
CCM2-210ENST00000478169 HNRNPRO43390 633 aaKnown RBP9.32□□□□□ -0.92
CCM2-210ENST00000478169 PSTPIP1O43586 416 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 SPOPO43791 374 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 TNNT1P13805 278 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 ITGALP20701 1170 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 COMTP21964 271 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 ELAVL4P26378 380 aaKnown RBP9.32□□□□□ -0.92
CCM2-210ENST00000478169 PDHA2P29803 388 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 ADRA1AP35348 466 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 GABRA4P48169 554 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 MSLNQ13421 630 aaPredicted RBP9.32□□□□□ -0.92
CCM2-210ENST00000478169 BOP1Q14137 746 aaKnown RBP9.32□□□□□ -0.92
CCM2-210ENST00000478169 TCEAL1Q15170 157 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 LLGL1Q15334 1064 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 CYP2A13Q16696 494 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 GPR33Q49SQ1 333 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 TFDP3Q5H9I0 405 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 KAZNQ674X7 775 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 ITPRIPL1Q6GPH6 555 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 MRPL14Q6P1L8 145 aaKnown RBP9.32□□□□□ -0.92
CCM2-210ENST00000478169 PPP1R32Q7Z5V6 425 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 LUZP1Q86V48 1076 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 PHC3Q8NDX5 983 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 OR8K1Q8NGG5 319 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 PPP4R1Q8TF05 950 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 TFGQ92734 400 aaPredicted RBP9.32□□□□□ -0.92
CCM2-210ENST00000478169 QKIQ96PU8 341 aaKnown RBP eCLIP9.32□□□□□ -0.92
CCM2-210ENST00000478169 DNAJC7Q99615 494 aa9.32□□□□□ -0.92
CCM2-210ENST00000478169 WDR77Q9BQA1 342 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms