RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 NXPE2Q96DL1 559 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 CNTNAP3BQ96NU0 1288 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 TGM7Q96PF1 710 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 CNTNAP3Q9BZ76 1288 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 STRADBQ9C0K7 418 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 SMYD2Q9NRG4 433 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 FAM114A2Q9NRY5 505 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 ZFATQ9P243 1243 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 TDRKHQ9Y2W6 561 aaKnown RBP10□□□□□ -0.81
HDAC6-222ENST00000478095 MED16Q9Y2X0 877 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 LOXL2Q9Y4K0 774 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 HEBP2Q9Y5Z4 205 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 PSAT1Q9Y617 370 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 NFS1Q9Y697 457 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 AK5Q9Y6K8 562 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 CCDC187A0A096LP49 1063 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 KRT87PA6NCN2 255 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 OR6C74A6NCV1 312 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 ESPNB1AK53 854 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 CAPN5O15484 640 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-222ENST00000478095 KIF1CO43896 1103 aaKnown RBP9.99□□□□□ -0.81
HDAC6-222ENST00000478095 BRINP1O60477 761 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 SLCO2B1O94956 709 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 AHSGP02765 367 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 RHOXF2BP0C7M4 288 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 NDUFS1P28331 727 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 MAGEA4P43358 317 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 BDKRB1P46663 353 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 CLCN7P51798 805 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 PGGT1BP53609 377 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 CBLBQ13191 982 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 SQSTM1Q13501 440 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 CLPPQ16740 277 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-222ENST00000478095 GLE1Q53GS7 698 aaKnown RBP9.99□□□□□ -0.81
HDAC6-222ENST00000478095 ACSBG2Q5FVE4 666 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 PLEKHS1Q5SXH7 462 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 WDR74Q6RFH5 385 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-222ENST00000478095 FAM92BQ6ZTR7 304 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 KIAA0408Q6ZU52 694 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 RAB11FIP2Q7L804 512 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 GPATCH11Q8N954 259 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 OR5K2Q8NHB8 316 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 LCN9Q8WX39 176 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 KCNJ9Q92806 393 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 LIN37Q96GY3 246 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-222ENST00000478095 GPR21Q99679 349 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 RHOXF2Q9BQY4 288 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 AARSD1Q9BTE6 412 aaKnown RBP9.99□□□□□ -0.81
HDAC6-222ENST00000478095 NRSN2Q9GZP1 204 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 TRIT1Q9H3H1 467 aaKnown RBP9.99□□□□□ -0.81
HDAC6-222ENST00000478095 EPB41L1Q9H4G0 881 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 MVB12BQ9H7P6 319 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 L2HGDHQ9H9P8 463 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 MOCS1Q9NZB8 636 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 PISDQ9UG56 409 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 ASXL3Q9C0F0 2248 aa9.99□□□□□ -0.81
HDAC6-222ENST00000478095 TCRBV9S1A1TA0A576 114 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 GSAPA4D1B5 854 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 OR5K3A6NET4 321 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 CXorf49A8MYA2 514 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-222ENST00000478095 PLD2O14939 933 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 KPNA5O15131 536 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 ZNF500O60304 480 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-222ENST00000478095 VPS26AO75436 327 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 RASSF9O75901 435 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 JMJD7P0C870 316 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 TPBGLP0DKB5 382 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 CCL4P13236 92 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 POLR2CP19387 275 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-222ENST00000478095 ITIH1P19827 911 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 MCM3P25205 808 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 ECHS1P30084 290 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 SEPHS1P49903 392 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 CDKN2DP55273 166 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 FRG1Q14331 258 aaKnown RBP9.98□□□□□ -0.81
HDAC6-222ENST00000478095 TEX35Q5T0J7 233 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 UBAP2Q5T6F2 1119 aaKnown RBP9.98□□□□□ -0.81
HDAC6-222ENST00000478095 C3orf62Q6ZUJ4 267 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 STRA8Q7Z7C7 330 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 OOSP2Q86WS3 158 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 FAM129CQ86XR2 697 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 PLXDC1Q8IUK5 500 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 CPNE9Q8IYJ1 553 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 TBC1D21Q8IYX1 336 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 FBXO39Q8N4B4 442 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 LMNTD1Q8N9Z9 388 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 WDR36Q8NI36 951 aaKnown RBP9.98□□□□□ -0.81
HDAC6-222ENST00000478095 CD200R1Q8TD46 325 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 ZFPM2Q8WW38 1151 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 GRAMD1AQ96CP6 724 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 IL17FQ96PD4 163 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 CMKLR1Q99788 373 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 DPYSL5Q9BPU6 564 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 PHACTR1Q9C0D0 580 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 SRMSQ9H3Y6 488 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 CCDC86Q9H6F5 360 aaKnown RBP9.98□□□□□ -0.81
HDAC6-222ENST00000478095 POLR1BQ9H9Y6 1135 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 LRRC4CQ9HCJ2 640 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 HRASLS2Q9NWW9 162 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 MTRF1LQ9UGC7 380 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms