RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 PPM1DO15297 605 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 ERLIN1O75477 346 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 LDOC1O95751 146 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-206ENST00000478048 TSPAN12O95859 305 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 VSIG8P0DPA2 414 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 HALP42357 657 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 UBE2IP63279 158 aaKnown RBP11.18□□□□□ -0.62
CBWD3-206ENST00000478048 PLOD1Q02809 727 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-206ENST00000478048 DNAJC3Q13217 504 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 UGT3A1Q6NUS8 523 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 GUSBP11Q6P575 273 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 CYHR1Q6ZMK1 362 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 PDZD3Q86UT5 571 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 ZNF761Q86XN6 746 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-206ENST00000478048 CFAP61Q8NHU2 1237 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 BAHD1Q8TBE0 780 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-206ENST00000478048 EEF1AKMT1Q8WVE0 214 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 ANKRD49Q8WVL7 239 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 HNRNPLLQ8WVV9 542 aaKnown RBP11.18□□□□□ -0.62
CBWD3-206ENST00000478048 TFGQ92734 400 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-206ENST00000478048 CNDP2Q96KP4 475 aaKnown RBP11.18□□□□□ -0.62
CBWD3-206ENST00000478048 CCDC77Q9BR77 488 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 KLHL42Q9P2K6 505 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 CPNE7Q9UBL6 633 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 FETUBQ9UGM5 382 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 TBK1Q9UHD2 729 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 PADI4Q9UM07 663 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 PLAAQ9Y263 795 aa11.18□□□□□ -0.62
CBWD3-206ENST00000478048 COL5A1P20908 1838 aaPredicted RBP11.17□□□□□ -0.62
CBWD3-206ENST00000478048 KIR2DS5A0A0G2JLQ3 304 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 A0A0G2JNG1 304 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 OR5K4A6NMS3 321 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 FOXO6A8MYZ6 492 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 TRIM49D1C9J1S8 452 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 KIR2DS3K7RE56 304 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 CASC3O15234 703 aaKnown RBP11.17□□□□□ -0.62
CBWD3-206ENST00000478048 MAN1A2O60476 641 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 WISP3O95389 354 aaPredicted RBP11.17□□□□□ -0.62
CBWD3-206ENST00000478048 ALDOAP04075 364 aaKnown RBP11.17□□□□□ -0.62
CBWD3-206ENST00000478048 MTHFD1P11586 935 aaKnown RBP11.17□□□□□ -0.62
CBWD3-206ENST00000478048 STMN1P16949 149 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 ZNF37AP17032 561 aaPredicted RBP11.17□□□□□ -0.62
CBWD3-206ENST00000478048 XRCC1P18887 633 aaPredicted RBP11.17□□□□□ -0.62
CBWD3-206ENST00000478048 SKIV2L2P42285 1042 aaKnown RBP11.17□□□□□ -0.62
CBWD3-206ENST00000478048 SERPINB9P50453 376 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 SLC12A2P55011 1212 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 HHEXQ03014 270 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 KIR2DS5Q14953 304 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 ZKSCAN8Q15776 578 aaPredicted RBP11.17□□□□□ -0.62
CBWD3-206ENST00000478048 INAVAQ3KP66 663 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 TTLL9Q3SXZ7 439 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 PIWIL4Q7Z3Z4 852 aaKnown RBP11.17□□□□□ -0.62
CBWD3-206ENST00000478048 SPATA6LQ8N4H0 392 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 DEFB124Q8NES8 71 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 MAPK15Q8TD08 544 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 SKA2Q8WVK7 121 aaPredicted RBP11.17□□□□□ -0.62
CBWD3-206ENST00000478048 NRTNQ99748 197 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 GPAMQ9HCL2 828 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 EURLQ9NYK6 297 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 FTSJ1Q9UET6 329 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 SLC24A2Q9UI40 661 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 MAP4K5Q9Y4K4 846 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 RNF215Q9Y6U7 377 aa11.17□□□□□ -0.62
CBWD3-206ENST00000478048 TLDC2A0PJX2 215 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 CPED1A4D0V7 1026 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 EME2A4GXA9 379 aaPredicted RBP11.16□□□□□ -0.62
CBWD3-206ENST00000478048 KRT87PA6NCN2 255 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 IFRD1O00458 451 aaPredicted RBP11.16□□□□□ -0.62
CBWD3-206ENST00000478048 SNRPAP09012 282 aaKnown RBP11.16□□□□□ -0.62
CBWD3-206ENST00000478048 SLC35E2BP0CK96 405 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 CKMT1AP12532 417 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 SLC2A4P14672 509 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 H2AFXP16104 143 aaPredicted RBP11.16□□□□□ -0.62
CBWD3-206ENST00000478048 FASLGP48023 281 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 CSRP3P50461 194 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 RAB10P61026 200 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 DAB2P98082 770 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 IFFO1Q0D2I5 559 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 ILF2Q12905 390 aaKnown RBP11.16□□□□□ -0.62
CBWD3-206ENST00000478048 PRKG2Q13237 762 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 NR0B2Q15466 257 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 RSPO4Q2I0M5 234 aaPredicted RBP11.16□□□□□ -0.62
CBWD3-206ENST00000478048 PPM1JQ5JR12 505 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 PERM1Q5SV97 790 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.16□□□□□ -0.62
CBWD3-206ENST00000478048 FBXO38Q6PIJ6 1188 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 SLC9B2Q86UD5 537 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 TRIM48Q8IWZ4 208 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 IQCKQ8N0W5 287 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 OR5AR1Q8NGP9 310 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 MZB1Q8WU39 189 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 JPH3Q8WXH2 748 aaPredicted RBP11.16□□□□□ -0.62
CBWD3-206ENST00000478048 CXorf40BQ96DE9 158 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 LINGO1Q96FE5 620 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 FERD3LQ96RJ6 166 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 UNKQ9C0B0 810 aaKnown RBP11.16□□□□□ -0.62
CBWD3-206ENST00000478048 SLC40A1Q9NP59 571 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 SNX15Q9NRS6 342 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 LRIT1Q9P2V4 623 aa11.16□□□□□ -0.62
CBWD3-206ENST00000478048 PSMC3IPQ9P2W1 217 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms