RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 GDAP1L1Q96MZ0 367 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 GPHA2Q96T91 129 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 PCDHB18PQ96TA0 734 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 MAGEH1Q9H213 219 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 ADNPQ9H2P0 1102 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 KLQ9UEF7 1012 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 ZNHIT2Q9UHR6 403 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 MAGEL2Q9UJ55 1249 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 NOCTQ9UK39 431 aaKnown RBP4.56□□□□□ -1.68
CKS1B-207ENST00000477676 PILRAQ9UKJ1 303 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 STAP1Q9ULZ2 295 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 PCDHGA3Q9Y5H0 932 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 VPS13CQ709C8 3753 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 CROCCQ5TZA2 2017 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 DNHD1Q96M86 4753 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 NIPBLQ6KC79 2804 aaeCLIP4.55□□□□□ -1.68
CKS1B-207ENST00000477676 IGHV1OR21-1A0A087WYE8 117 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 TCRBV5S1A1TA0A578 114 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 TCRBV16S1A1N1A0A5B0 115 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 BICDL2A1A5D9 508 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 PRSS38A1L453 326 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 TMEM110-MUSTN1A8MSY1 372 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 A8MX80 341 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 RASA4BC9J798 803 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 STMND1H3BQB6 276 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 TRAFD1O14545 582 aaPredicted RBP4.55□□□□□ -1.68
CKS1B-207ENST00000477676 EPHB6O15197 1021 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 MTSS1O43312 755 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 RASA4O43374 803 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 NUDT21O43809 227 aaKnown RBP4.55□□□□□ -1.68
CKS1B-207ENST00000477676 B3GALT2O43825 422 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 CPNE6O95741 557 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 IGSF6O95976 241 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 SOD1P00441 154 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 HOXC4P09017 264 aaPredicted RBP4.55□□□□□ -1.68
CKS1B-207ENST00000477676 SFTPCP11686 197 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 CCNB1P14635 433 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 TNFAIP3P21580 790 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 CD82P27701 267 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 ALDH4A1P30038 563 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 RFC1P35251 1148 aaPredicted RBP4.55□□□□□ -1.68
CKS1B-207ENST00000477676 PTPN9P43378 593 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 UQCRFS1P47985 274 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 POLD2P49005 469 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 LIMK2P53671 638 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 MLLT10P55197 1068 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 RHOAP61586 193 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 STIM1Q13586 685 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 IHHQ14623 411 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 TIGD2Q4W5G0 525 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 INO80DQ53TQ3 878 aaPredicted RBP4.55□□□□□ -1.68
CKS1B-207ENST00000477676 HSP90AA4PQ58FG1 418 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 KLHDC7AQ5VTJ3 777 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 AFMIDQ63HM1 303 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 PNCKQ6P2M8 343 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 WDR59Q6PJI9 974 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 UBE2R2Q712K3 238 aaPredicted RBP4.55□□□□□ -1.68
CKS1B-207ENST00000477676 ARHGAP12Q8IWW6 846 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 RTL3Q8N8U3 475 aaKnown RBP4.55□□□□□ -1.68
CKS1B-207ENST00000477676 TMEM35BQ8NCS4 154 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 OR6C4Q8NGE1 309 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 OR56A4Q8NGH8 313 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 SLC30A5Q8TAD4 765 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 HCAR2Q8TDS4 363 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 TMEM159Q96B96 161 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 TBC1D31Q96DN5 1066 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 ARHGEF26Q96DR7 871 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 SLC45A3Q96JT2 553 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 HIST1H2AHQ96KK5 128 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 COQ10AQ96MF6 247 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 SMIM14Q96QK8 99 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 TAAR9Q96RI9 348 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 CMKLR1Q99788 373 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 HIST1H2AJQ99878 128 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 FRMD8Q9BZ67 464 aaPredicted RBP4.55□□□□□ -1.68
CKS1B-207ENST00000477676 B3GNT4Q9C0J1 378 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 CDH19Q9H159 772 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 DPEP2Q9H4A9 486 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 LRRC19Q9H756 370 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 SYNCQ9H7C4 482 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 SUDS3Q9H7L9 328 aaPredicted RBP4.55□□□□□ -1.68
CKS1B-207ENST00000477676 APMAPQ9HDC9 416 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 GPATCH2LQ9NWQ4 482 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 SEPT10Q9P0V9 454 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 TAAR2Q9P1P5 351 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 PDP2Q9P2J9 529 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 ATP8A1Q9Y2Q0 1164 aa4.55□□□□□ -1.68
CKS1B-207ENST00000477676 MRPS18BQ9Y676 258 aaKnown RBP4.55□□□□□ -1.68
CKS1B-207ENST00000477676 NUP210LQ5VU65 1888 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 NAV3Q8IVL0 2385 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 ZSCAN5CA6NGD5 496 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-207ENST00000477676 F8VZ95 297 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 TEX33O43247 280 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 CCP110O43303 1012 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 RAD1O60671 282 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 PRAMEF11O60813 436 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 LSM8O95777 96 aaKnown RBP4.54□□□□□ -1.68
CKS1B-207ENST00000477676 PRKAR1AP10644 381 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 THRAP10827 490 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 UNGP13051 313 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms