RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 BFARQ9NZS9 450 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 PLAGL1Q9UM63 463 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 CDYLQ9Y232 598 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 SLC5A10A0PJK1 596 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 OR5K3A6NET4 321 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 B4E171 279 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 BTN3A3O00478 584 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 RASSF9O75901 435 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 AP2A2O94973 939 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 POLR2CP19387 275 aaPredicted RBP17.17■□□□□ 0.34
PTPN7-209ENST00000477554 ACADLP28330 430 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 TSPAN7P41732 249 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 MAGEA3P43357 314 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 KPNA2P52292 529 aaKnown RBP17.17■□□□□ 0.34
PTPN7-209ENST00000477554 MC2RQ01718 297 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 CBLBQ13191 982 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 CTSL3PQ5NE16 218 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 CACHD1Q5VU97 1274 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 KIAA1614Q5VZ46 1190 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 FAM136AQ96C01 138 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 LRRC39Q96DD0 335 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 DPH1Q9BZG8 443 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 SPRY4Q9C004 299 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 P2RY12Q9H244 342 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 ZNF768Q9H5H4 540 aaKnown RBP17.17■□□□□ 0.34
PTPN7-209ENST00000477554 HRASLS2Q9NWW9 162 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 GALPQ9UBC7 116 aa17.17■□□□□ 0.34
PTPN7-209ENST00000477554 BSNQ9UPA5 3926 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 E7ESA3 106 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 TIAF1O95411 115 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 ANKRD34CP0C6C1 535 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 MYBL2P10244 700 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 LIPCP11150 499 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 FOLR1P15328 257 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 SLMAPQ14BN4 828 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 MSS51Q4VC12 460 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 SOWAHCQ53LP3 525 aaPredicted RBP17.16■□□□□ 0.34
PTPN7-209ENST00000477554 ARMC3Q5W041 872 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 NLRP9Q7RTR0 991 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 RBM12BQ8IXT5 1001 aaKnown RBP17.16■□□□□ 0.34
PTPN7-209ENST00000477554 OR52E1Q8NGJ3 308 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 SGSM3Q96HU1 749 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 KLHL25Q9H0H3 589 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 EPB41L1Q9H4G0 881 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 AKAP7Q9P0M2 348 aaPredicted RBP17.16■□□□□ 0.34
PTPN7-209ENST00000477554 RUVBL2Q9Y230 463 aaKnown RBP17.16■□□□□ 0.34
PTPN7-209ENST00000477554 PCDHGA3Q9Y5H0 932 aa17.16■□□□□ 0.34
PTPN7-209ENST00000477554 CCDC151A5D8V7 595 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 SDR42E2A6NKP2 422 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 BTN3A1O00481 513 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 CYP4F2P78329 520 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 FOXM1Q08050 763 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 BBS9Q3SYG4 887 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 EMBQ6PCB8 327 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 PRSS42Q7Z5A4 293 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 CCDC25Q86WR0 208 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 KLHL6Q8WZ60 621 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 TFGQ92734 400 aaPredicted RBP17.15■□□□□ 0.34
PTPN7-209ENST00000477554 NKD1Q969G9 470 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 SIGLEC10Q96LC7 697 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 OR6C1Q96RD1 312 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 MRM3Q9HC36 420 aaKnown RBP17.15■□□□□ 0.34
PTPN7-209ENST00000477554 ARGLU1Q9NWB6 273 aaPredicted RBP17.15■□□□□ 0.34
PTPN7-209ENST00000477554 EPHA6Q9UF33 1036 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 TSR3Q9UJK0 312 aaKnown RBP17.15■□□□□ 0.34
PTPN7-209ENST00000477554 ICKQ9UPZ9 632 aa17.15■□□□□ 0.34
PTPN7-209ENST00000477554 SNRNP200O75643 2136 aaKnown RBP17.15■□□□□ 0.34
PTPN7-209ENST00000477554 ZCWPW2A0A1B0GU75 182 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 MAGEB16A2A368 324 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 EBLN1P0CF75 366 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 DHX9Q08211 1270 aaKnown RBP17.14■□□□□ 0.33
PTPN7-209ENST00000477554 PDIA2Q13087 525 aaKnown RBP17.14■□□□□ 0.33
PTPN7-209ENST00000477554 LAMB3Q13751 1172 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 ANKRD20A4Q4UJ75 823 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 CASC4Q6P4E1 433 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 RELL1Q8IUW5 271 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 IGDCC3Q8IVU1 814 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 GSPT2Q8IYD1 628 aaKnown RBP17.14■□□□□ 0.33
PTPN7-209ENST00000477554 PEX13Q92968 403 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.14■□□□□ 0.33
PTPN7-209ENST00000477554 ZNF669Q96BR6 464 aaPredicted RBP17.14■□□□□ 0.33
PTPN7-209ENST00000477554 BIRC8Q96P09 236 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 WDR83Q9BRX9 315 aaKnown RBP17.14■□□□□ 0.33
PTPN7-209ENST00000477554 DDA1Q9BW61 102 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 RAB33BQ9H082 229 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 PLAC1Q9HBJ0 212 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 SAYSD1Q9NPB0 183 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 PILRAQ9UKJ1 303 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 KALRNO60229 2985 aa17.14■□□□□ 0.33
PTPN7-209ENST00000477554 LIN7AO14910 233 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 FTH1P02794 183 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 PRB1P04280 392 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 OR56A5P0C7T3 313 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 PVRP15151 417 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 EIF3BP55884 814 aaKnown RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 TMPRSS3P57727 454 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 HSPA14Q0VDF9 509 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 KRT33BQ14525 404 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 HP1BP3Q5SSJ5 553 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 DCAF12Q5T6F0 453 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms