RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 KRT87PA6NCN2 255 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 CXCR6O00574 342 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 DNTTP04053 509 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 UROSP10746 265 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 MSH3P20585 1137 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 CTSKP43235 329 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 BCL7AQ4VC05 210 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 XKR7Q5GH72 579 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 C9orf57Q5W0N0 161 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 OR8H2Q8N162 312 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 DCBLD1Q8N8Z6 715 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 B3GALNT2Q8NCR0 500 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 APPL2Q8NEU8 664 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 EDEM1Q92611 657 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 RHBDF1Q96CC6 855 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 ATOH8Q96SQ7 321 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 CDADC1Q9BWV3 514 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 NUSAP1Q9BXS6 441 aaKnown RBP13.19□□□□□ -0.3
DFFB-209ENST00000477548 VAPAQ9P0L0 249 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 MKLN1Q9UL63 735 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 PEX16Q9Y5Y5 336 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 MCM3APO60318 1980 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 A0A0G2JMZ2 1700 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 LRRC37A2A6NM11 1700 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 ELOVL7A1L3X0 281 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 ASB14A6NK59 587 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 TSPAN1O60635 241 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 C22orf31O95567 290 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 DDOSTP39656 456 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 SLC15A1P46059 708 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 PPP3CCP48454 512 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 SERPINH1P50454 418 aaKnown RBP13.19□□□□□ -0.3
DFFB-209ENST00000477548 GBX1Q14549 363 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 ZNF517Q6ZMY9 492 aaPredicted RBP13.19□□□□□ -0.3
DFFB-209ENST00000477548 ARMCX2Q7L311 632 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 CTU1Q7Z7A3 348 aaKnown RBP13.19□□□□□ -0.3
DFFB-209ENST00000477548 CYP4Z1Q86W10 505 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 LINC00469Q8N7U9 141 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 ZNF548Q8NEK5 533 aaPredicted RBP13.19□□□□□ -0.3
DFFB-209ENST00000477548 OR8J3Q8NGG0 315 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 OR10Q1Q8NGQ4 319 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 STMN3Q9NZ72 180 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 EVPLQ92817 2033 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 GRXCR2A6NFK2 248 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 DSCR3O14972 297 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 RECQL5O94762 991 aaPredicted RBP13.18□□□□□ -0.3
DFFB-209ENST00000477548 ZNF37AP17032 561 aaPredicted RBP13.18□□□□□ -0.3
DFFB-209ENST00000477548 PRKACBP22694 351 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 KRT20P35900 424 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 SCNN1GP51170 649 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 ARSDP51689 593 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 GTF2H3Q13889 308 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 STARD3Q14849 445 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 CAPN13Q6MZZ7 669 aaPredicted RBP13.18□□□□□ -0.3
DFFB-209ENST00000477548 DPP9Q86TI2 863 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 DEPDC4Q8N2C3 294 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 KBTBD8Q8NFY9 601 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 PHOX2BQ99453 314 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 NDFIP2Q9NV92 336 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
DFFB-209ENST00000477548 A3GALT2U3KPV4 340 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 WDR90Q96KV7 1748 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 LOC110117498-PIK3R3F6TDL0 507 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 MATN3O15232 486 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 CNMDO75829 334 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 G6PDP11413 515 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 FDXRP22570 491 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 RRM2P31350 389 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 ZNF33AQ06730 810 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 CYP4F3Q08477 520 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 KEAP1Q14145 624 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 AAK1Q2M2I8 961 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 LYPD8Q6UX82 237 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 NRARPQ7Z6K4 114 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 ANGPTL6Q8NI99 470 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 RHEBL1Q8TAI7 183 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 STAG3L4Q8TBR4 150 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 CEP19Q96LK0 163 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 C8orf48Q96LL4 319 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 PPP1R2P1Q96PQ5 205 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 ERVK13-1Q9NX77 482 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 CSADQ9Y600 493 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 HSPE1-MOB4S4R3N1 261 aa13.18□□□□□ -0.3
DFFB-209ENST00000477548 MYLKQ15746 1914 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 MYO1GB0I1T2 1018 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 ERVH48-1M5A8F1 160 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 SLC7A4O43246 635 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 SCELO95171 688 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 USP17L7P0C7H9 530 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 ARHGDIAP52565 204 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 ITKQ08881 620 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 MAD2L1BPQ15013 274 aaPredicted RBP13.17□□□□□ -0.3
DFFB-209ENST00000477548 SUZ12Q15022 739 aaKnown RBP13.17□□□□□ -0.3
DFFB-209ENST00000477548 PON2Q15165 354 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 LRRC26Q2I0M4 334 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 PRSS36Q5K4E3 855 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 CLEC20AQ6ZU45 233 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 ZNF438Q7Z4V0 828 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 RAB43Q86YS6 212 aa13.17□□□□□ -0.3
DFFB-209ENST00000477548 FBXO16Q8IX29 292 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms