RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 C14orf79Q96F83 325 aa6.73□□□□□ -1.33
LRCH3-215ENST00000476664 ZC3HAV1LQ96H79 300 aaKnown RBP6.73□□□□□ -1.33
LRCH3-215ENST00000476664 BOD1Q96IK1 185 aa6.73□□□□□ -1.33
LRCH3-215ENST00000476664 SLITRK1Q96PX8 696 aa6.73□□□□□ -1.33
LRCH3-215ENST00000476664 SEMA3CQ99985 751 aa6.73□□□□□ -1.33
LRCH3-215ENST00000476664 WDR83Q9BRX9 315 aaKnown RBP6.73□□□□□ -1.33
LRCH3-215ENST00000476664 TKTL2Q9H0I9 626 aa6.73□□□□□ -1.33
LRCH3-215ENST00000476664 TDRD3Q9H7E2 651 aaKnown RBP6.73□□□□□ -1.33
LRCH3-215ENST00000476664 CHMP1AQ9HD42 196 aaPredicted RBP6.73□□□□□ -1.33
LRCH3-215ENST00000476664 TXNRD2Q9NNW7 524 aa6.73□□□□□ -1.33
LRCH3-215ENST00000476664 PPANQ9NQ55 473 aaKnown RBP6.73□□□□□ -1.33
LRCH3-215ENST00000476664 CENPMQ9NSP4 180 aa6.73□□□□□ -1.33
LRCH3-215ENST00000476664 NMRK1Q9NWW6 199 aa6.73□□□□□ -1.33
LRCH3-215ENST00000476664 SOHLH2Q9NX45 425 aa6.73□□□□□ -1.33
LRCH3-215ENST00000476664 TRIM10Q9UDY6 481 aa6.73□□□□□ -1.33
LRCH3-215ENST00000476664 MAD2L2Q9UI95 211 aa6.73□□□□□ -1.33
LRCH3-215ENST00000476664 NOX1Q9Y5S8 564 aa6.73□□□□□ -1.33
LRCH3-215ENST00000476664 TEX51A0A1B0GUA7 166 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 TCRBV7S3A2A0A539 114 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 TYW5A2RUC4 315 aaKnown RBP6.72□□□□□ -1.33
LRCH3-215ENST00000476664 CFAP73A6NFT4 308 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 PES1O00541 588 aaKnown RBP6.72□□□□□ -1.33
LRCH3-215ENST00000476664 PRYO14603 147 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 RFPL3SP0C7P2 107 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 EBLN1P0CF75 366 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 YWHAQP27348 245 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 TMOD1P28289 359 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 APOBEC3AP31941 199 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-215ENST00000476664 PITPNBP48739 271 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 CYP2J2P51589 502 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 CFHR3Q02985 330 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 GRIK3Q13003 919 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 LPIN1Q14693 890 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 SOWAHAQ2M3V2 549 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 HERC4Q5GLZ8 1057 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-215ENST00000476664 RABL3Q5HYI8 236 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 TTC39AQ5SRH9 613 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 TMEM63BQ5T3F8 832 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 LCE2AQ5TA79 106 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-215ENST00000476664 TMEM182Q6ZP80 229 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-215ENST00000476664 SYVN1Q86TM6 617 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 TLK2Q86UE8 772 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 CIR1Q86X95 450 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-215ENST00000476664 SFTPA1Q8IWL2 248 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 EXD3Q8N9H8 876 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 SLC44A5Q8NCS7 719 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 RP9Q8TA86 221 aaKnown RBP6.72□□□□□ -1.33
LRCH3-215ENST00000476664 FAR1Q8WVX9 515 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 SLAMF9Q96A28 289 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 MBD6Q96DN6 1003 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 ZNF560Q96MR9 790 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 MS4A10Q96PG2 267 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 KLHL5Q96PQ7 755 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 ERP44Q9BS26 406 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 CARD6Q9BX69 1037 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 UPF3BQ9BZI7 483 aaKnown RBP6.72□□□□□ -1.33
LRCH3-215ENST00000476664 TM9SF3Q9HD45 589 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 EQTNQ9NQ60 294 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 PRMT7Q9NVM4 692 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-215ENST00000476664 ASNSD1Q9NWL6 643 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 DLL3Q9NYJ7 618 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 SIRT4Q9Y6E7 314 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-215ENST00000476664 U3KQV3 271 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 ZNF521Q96K83 1311 aa6.72□□□□□ -1.33
LRCH3-215ENST00000476664 COL4A4P53420 1690 aaPredicted RBP6.71□□□□□ -1.33
LRCH3-215ENST00000476664 A0A0G2JLL6 359 aaPredicted RBP6.71□□□□□ -1.34
LRCH3-215ENST00000476664 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.71□□□□□ -1.34
LRCH3-215ENST00000476664 A0A1W2PPM1 405 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 C1orf226A1L170 272 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 DENND3A2RUS2 1198 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 FAM157AC9JC47 383 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 KBTBD13C9JR72 458 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 CXCL11O14625 94 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 SELENOFO60613 162 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 HSF2BPO75031 334 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 PRDM1O75626 825 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 ADCY5O95622 1261 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 PTBP3O95758 552 aaKnown RBP6.71□□□□□ -1.34
LRCH3-215ENST00000476664 GH2P01242 217 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 C8AP07357 584 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 ELANEP08246 267 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 TIA1P31483 386 aaKnown RBP eCLIP6.71□□□□□ -1.342e-6■■■■□ 21.2
LRCH3-215ENST00000476664 SHMT1P34896 483 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 SOX6P35712 828 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 VPS41P49754 854 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 VAV2P52735 878 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 CCNA1P78396 465 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 MAPK11Q15759 364 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 TBC1D25Q3MII6 688 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 PLK5Q496M5 336 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 ATP13A5Q4VNC0 1218 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 PDCD4Q53EL6 469 aaKnown RBP6.71□□□□□ -1.34
LRCH3-215ENST00000476664 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.71□□□□□ -1.34
LRCH3-215ENST00000476664 C10orf76Q5T2E6 689 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 RAET1GQ6H3X3 334 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 LRRC8EQ6NSJ5 796 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 SLC27A1Q6PCB7 646 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 TEX38Q6PEX7 206 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 SLC36A4Q6YBV0 504 aa6.71□□□□□ -1.34
LRCH3-215ENST00000476664 QSOX2Q6ZRP7 698 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms